RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, human

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM41-206	ENST00000514219	ZG16	O60844	167 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	SEC14L2	O76054	403 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	GPANK1	O95872	356 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	SERPINA5	P05154	406 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	UBC	P0CG48	685 aa	Known RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	GAL	P22466	123 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	TUBG1	P23258	451 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	CFL1	P23528	166 aa	Known RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	GDI2	P50395	445 aa	Known RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	PIGF	Q07326	219 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	XAF1	Q6GPH4	301 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	LRRN1	Q6UXK5	716 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	CFAP77	Q6ZQR2	320 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	GATAD2B	Q8WXI9	593 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	RNASE6	Q93091	150 aa	Known RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	FBXO17	Q96EF6	278 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	MAP6	Q96JE9	813 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	KCNS3	Q9BQ31	491 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	BCL7B	Q9BQE9	202 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	RGCC	Q9H4X1	137 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	OPA3	Q9H6K4	179 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	TUBG2	Q9NRH3	451 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	NDRG3	Q9UGV2	375 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	COPS3	Q9UNS2	423 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	LSM2	Q9Y333	95 aa	Known RBP	13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219		R4GMQ9	66 aa		13.92	□□□□□ -0.18
TRIM41-206	ENST00000514219	SMIM31	A0A1B0GVY4	71 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	TMEM269	A0A1B0GVZ9	245 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	MMP7	P09237	267 aa	Predicted RBP	13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	CBR1	P16152	277 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	CPE	P16870	476 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	EDNRA	P25101	427 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	MAPK3	P27361	379 aa	Predicted RBP	13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	UGT2B10	P36537	528 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	OR12D2	P58182	307 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	TP53I3	Q53FA7	332 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	HIKESHI	Q53FT3	197 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	ARMCX4	Q5H9R4	360 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	PABPC1L2A	Q5JQF8	200 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF684	Q5T5D7	378 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	BCL2L15	Q5TBC7	163 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	OR2G6	Q5TZ20	316 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	LIPN	Q5VXI9	398 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	CORO6	Q6QEF8	472 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	PAMR1	Q6UXH9	720 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	STAC2	Q6ZMT1	411 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	KLB	Q86Z14	1044 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	OR5L1	Q8NGL2	311 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	SMIM19	Q96E16	107 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	PELI1	Q96FA3	418 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	DOK1	Q99704	481 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	ACTR6	Q9GZN1	396 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	EIF3K	Q9UBQ5	218 aa	Known RBP	13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	CLEC2D	Q9UHP7	191 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	MRM2	Q9UI43	246 aa	Known RBP	13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	SPEF1	Q9Y4P9	236 aa		13.91	□□□□□ -0.18
TRIM41-206	ENST00000514219	TRBV2	A0A0J9YWF9	115 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219		M0R135	149 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	SYNGR3	O43761	229 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	HLA-H	P01893	362 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	STOM	P27105	288 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	GABRA5	P31644	462 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	MAP2K4	P45985	399 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	SLC6A9	P48067	706 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	HCCS	P53701	268 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	PSG4	Q00888	419 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	TPBG	Q13641	420 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	PPA1	Q15181	289 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	GDPGP1	Q6ZNW5	385 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF283	Q8N7M2	679 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	RELL2	Q8NC24	303 aa	Predicted RBP	13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	SGCD	Q92629	289 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF799	Q96GE5	643 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	ZNF649	Q9BS31	505 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	FAM192A	Q9GZU8	254 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	ACOXL	Q9NUZ1	547 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	SLCO1C1	Q9NYB5	712 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	INTS1	Q8N201	2190 aa	Known RBP	13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	ABCA2	Q9BZC7	2435 aa		13.9	□□□□□ -0.18
TRIM41-206	ENST00000514219	SPG11	Q96JI7	2443 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	PLPP2	O43688	288 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	CLDN14	O95500	239 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	ABHD16A	O95870	558 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	HLA-DPB1	P04440	258 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	TFAP2A	P05549	437 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	LCK	P06239	509 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	CEL	P19835	753 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	OTX1	P32242	354 aa	Predicted RBP	13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	RPS27	P42677	84 aa	Known RBP	13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	RANBP1	P43487	201 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	ALDH3B2	P48448	385 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	CX3CR1	P49238	355 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	ALKBH1	Q13686	389 aa	Known RBP	13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	CDK5R1	Q15078	307 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	TESK1	Q15569	626 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	YIF1B	Q5BJH7	314 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	TMEM244	Q5VVB8	128 aa		13.89	□□□□□ -0.19
TRIM41-206	ENST00000514219	SSX6	Q7RTT6	188 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms