RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RANBP1P43487 201 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
VCAN-211ENST00000513984 BCL2A1Q16548 175 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 SLC36A2Q495M3 483 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 NKAIN3Q8N8D7 197 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OR51A2Q8NGJ7 313 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
VCAN-211ENST00000513984 FREM1Q5H8C1 2179 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 A0A1B0GVI7 797 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 CCL1P22362 96 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
VCAN-211ENST00000513984 PTH2RP49190 550 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 POU3F4P49335 361 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 ARG2P78540 354 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 CD300CQ08708 224 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 GPR176Q14439 515 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
VCAN-211ENST00000513984 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 LYPD6Q86Y78 171 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 MEIOBQ8N635 442 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 ZNF283Q8N7M2 679 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OR51D1Q8NGF3 324 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 OR51E1Q8TCB6 317 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 FAM3DQ96BQ1 224 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 ITPKCQ96DU7 683 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 RNF121Q9H920 327 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 PLEKHA1Q9HB21 404 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 CRLF2Q9HC73 371 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 ACKR4Q9NPB9 350 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 TMEM38BQ9NVV0 291 aa13.16□□□□□ -0.3
VCAN-211ENST00000513984 PAQR5Q9NXK6 330 aaPredicted RBP13.16□□□□□ -0.3
VCAN-211ENST00000513984 MUC6Q6W4X9 2439 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 DMXL1Q9Y485 3027 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 RTTNQ86VV8 2226 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 CST2P09228 141 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 CD3GP09693 182 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 CDK2P24941 298 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 DDOSTP39656 456 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 NOVA1P51513 510 aaKnown RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 MRPS10P82664 201 aaKnown RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 ELFN2Q5R3F8 820 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 ZNF529Q6P280 563 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 LINGO2Q7L985 606 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 FAM109AQ8N4B1 249 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 TMEM178AQ8NBL3 297 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 OR6M1Q8NGM8 313 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 C15orf40Q8WUR7 153 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 FGGYQ96C11 551 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 FBXO17Q96EF6 278 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 ALKBH3Q96Q83 286 aaPredicted RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 SLC17A5Q9NRA2 495 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 ZNF319Q9P2F9 582 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 SLC5A6Q9Y289 635 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
VCAN-211ENST00000513984 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
VCAN-211ENST00000513984 GABARAPH6UMI1 98 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 ACTL6AO96019 429 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 SLC2A1P11166 492 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 WT1P19544 449 aaPredicted RBP13.14□□□□□ -0.31
VCAN-211ENST00000513984 HTR2CP28335 458 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 SLC6A1P30531 599 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 SRYQ05066 204 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 ANKRD16Q6P6B7 361 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 ZNF813Q6ZN06 617 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
VCAN-211ENST00000513984 TOMM5Q8N4H5 51 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 HPS1Q92902 700 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 FOXRED1Q96CU9 486 aaPredicted RBP13.14□□□□□ -0.31
VCAN-211ENST00000513984 AUNIPQ9H7T9 357 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 RHBDD3Q9Y3P4 386 aa13.14□□□□□ -0.31
VCAN-211ENST00000513984 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 XRCC3O43542 346 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 SYNGR4O95473 234 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 ITGB2P05107 769 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 ANOS1P23352 680 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 BTCP35070 178 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 GALK2Q01415 458 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 CARTPTQ16568 116 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 C2orf76Q3KRA6 126 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 GLYATL3Q5SZD4 288 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms