RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CMBLQ96DG6 245 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 DIRC2Q96SL1 478 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 ATF6BQ99941 703 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 SOX7Q9BT81 388 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 TMEFF2Q9UIK5 374 aaPredicted RBP8.25□□□□□ -1.09
RNF4-221ENST00000513643 PURGQ9UJV8 347 aaKnown RBP8.25□□□□□ -1.09
RNF4-221ENST00000513643 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 GRIP1Q9Y3R0 1128 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 FAM183AA6NL82 134 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 RIIAD1A6NNX1 92 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 H3BN98 237 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 H3BNX3 289 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 ZNF593O00488 134 aaPredicted RBP8.24□□□□□ -1.09
RNF4-221ENST00000513643 E2F6O75461 281 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 CRLF1O75462 422 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 GLCEO94923 617 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 GYPBP06028 91 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 ZNF3P17036 446 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 FASP25445 335 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 RPS27P42677 84 aaKnown RBP8.24□□□□□ -1.09
RNF4-221ENST00000513643 ENTPD1P49961 510 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 CRISP1P54107 249 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 ESRRGP62508 458 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 CCL8P80075 99 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 TRIP10Q15642 601 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 SPRNQ5BIV9 151 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 C1orf146Q5VVC0 180 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 TMEM154Q6P9G4 183 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 PRSS45Q7RTY3 260 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 HIPK1Q86Z02 1210 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 OR2AJ1Q8NGZ0 328 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 RNF133Q8WVZ7 376 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 PITX2Q99697 317 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 CDADC1Q9BWV3 514 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 MED20Q9H944 212 aa8.24□□□□□ -1.09
RNF4-221ENST00000513643 ZNF275Q9NSD4 429 aaPredicted RBP8.24□□□□□ -1.09
RNF4-221ENST00000513643 C5orf63A6NC05 138 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 IQCF6A8MYZ5 107 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 G3V2T6 193 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 WNT9BO14905 357 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 PRODHO43272 600 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 MITFO75030 526 aaPredicted RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 HLA-DQA2P01906 255 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 MT-ND5P03915 603 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 ZNF823P16415 610 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 EPHA2P29317 976 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 IL2RGP31785 369 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 GZMKP49863 264 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 LMO4P61968 165 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 PPP2R2BQ00005 443 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 GGTLC2Q14390 218 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 GK2Q14410 553 aaPredicted RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 HLXQ14774 488 aaPredicted RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 PTGES3Q15185 160 aaKnown RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 TMEM236Q5W0B7 351 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 DCXRQ7Z4W1 244 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 ATG16L2Q8NAA4 619 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 ICA1LQ8NDH6 482 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 OR8G5Q8NG78 346 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 OR5L1Q8NGL2 311 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 SNX33Q8WV41 574 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 LRTOMTQ8WZ04 291 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 SPSB4Q96A44 273 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 MSI2Q96DH6 328 aaKnown RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 CENPNQ96H22 339 aaPredicted RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 SLC30A2Q9BRI3 323 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 ZNF556Q9HAH1 456 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 MSL2Q9HCI7 577 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 PAPOLBQ9NRJ5 636 aaKnown RBP8.23□□□□□ -1.09
RNF4-221ENST00000513643 POLR1DQ9Y2S0 133 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 CACNG2Q9Y698 323 aa8.23□□□□□ -1.09
RNF4-221ENST00000513643 IGHV1-69-2A0A0G2JMI3 117 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 PLSCR5A0PG75 271 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 LRP5LA4QPB2 252 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 CCDC182A6NF36 153 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZAR1LA6NP61 321 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 A8MV72 311 aaPredicted RBP8.22□□□□□ -1.09
RNF4-221ENST00000513643 F5H5K5 113 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 M0R135 149 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SPRY3O43610 288 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 FCGR1AP12314 374 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 POU1F1P28069 291 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 GSTT1P30711 240 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 OPRL1P41146 370 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 CHN2P52757 468 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 TPTEP56180 551 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SNAI3Q3KNW1 292 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 ZMAT1Q5H9K5 638 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SLC35D3Q5M8T2 416 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 AADACL4Q5VUY2 407 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 SLX4IPQ5VYV7 408 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 C12orf73Q69YU5 71 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 PLBD1Q6P4A8 553 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 DRAM2Q6UX65 266 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 USP51Q70EK9 711 aa8.22□□□□□ -1.09
RNF4-221ENST00000513643 KRT74Q7RTS7 529 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms