RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FAM166BA8MTA8 275 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 SLC17A2O00624 439 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 MAGEB3O15480 346 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ALX3O95076 343 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 PAHP00439 452 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ANXA2P07355 339 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 SNRPBP14678 240 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 WT1P19544 449 aaPredicted RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 HSD11B1P28845 292 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 DDOSTP39656 456 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 MRPS10P82664 201 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 SCRN3Q0VDG4 424 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 P2RY14Q15391 338 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 TAF13Q15543 124 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 SGCAQ16586 387 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 KRTAP27-1Q3LI81 207 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 CCDC92Q53HC0 331 aaPredicted RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 ELFN2Q5R3F8 820 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 C1orf100Q5SVJ3 147 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 GLT8D1Q68CQ7 371 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 IGFL3Q6UXB1 125 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 SPATC1Q76KD6 591 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZNF433Q8N7K0 673 aaPredicted RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 NKAIN3Q8N8D7 197 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 PLPP7Q8NBV4 271 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 FDCSPQ8NFU4 85 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZNF671Q8TAW3 534 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 LGALS14Q8TCE9 139 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ITFG2Q969R8 447 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 PPP1R14AQ96A00 147 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZNF845Q96IR2 970 aaPredicted RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 SMAD5Q99717 465 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 RBM24Q9BX46 236 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 HDHD2Q9H0R4 259 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 SLC25A18Q9H1K4 315 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 SLC6A15Q9H2J7 730 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 GPR35Q9HC97 309 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 C14orf119Q9NWQ9 140 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ATPIF1Q9UII2 106 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 CDV3Q9UKY7 258 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 MCTS1Q9ULC4 181 aaKnown RBP7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZNF175Q9Y473 711 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZNF407Q9C0G0 2248 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 ZFYVE26Q68DK2 2539 aa7.37□□□□□ -1.23
RNF4-220ENST00000513578 CNOT1A5YKK6 2376 aaKnown RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 TRGV5A0A0B4J1U4 118 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 A0A0G2JMP0 313 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 A0A0X1KG70 313 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 A0A1B0GVI7 797 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 A6NL46 340 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 P2RY10O00398 339 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 RER1O15258 196 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PLA2G10O15496 165 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SYT7O43581 403 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PFDN1O60925 122 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 CRYGSP22914 178 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 AZGP1P25311 298 aaKnown RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 CCL11P51671 97 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 ART1P52961 327 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PCBD1P61457 104 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SRSF6Q13247 344 aaKnown RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 RAB35Q15286 201 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 HES5Q5TA89 166 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 TRIQKQ629K1 86 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 CCBE1Q6UXH8 406 aaPredicted RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 DNM1P46Q6ZS02 220 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 DOK3Q7L591 496 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SERPINA12Q8IW75 414 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 CMTM4Q8IZR5 234 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 C19orf18Q8NEA5 215 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 DUSP18Q8NEJ0 188 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 OR4M2Q8NGB6 313 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 OR6M1Q8NGM8 313 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 TRIM63Q969Q1 353 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SLC25A28Q96A46 364 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PTX4Q96A99 478 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 C10orf35Q96D05 121 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 ORAI1Q96D31 301 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 HAVCR1Q96D42 359 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SLC25A38Q96DW6 304 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 S100A16Q96FQ6 103 aaKnown RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 WDYHV1Q96HA8 205 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 FOXB1Q99853 325 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PRDM14Q9GZV8 571 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SLC22A4Q9H015 551 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 SLCO5A1Q9H2Y9 848 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 LIN7BQ9HAP6 207 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 PLEKHA1Q9HB21 404 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 OR5V1Q9UGF6 321 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 GTF2A1LQ9UNN4 478 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 NOSIPQ9Y314 301 aaKnown RBP7.36□□□□□ -1.23
RNF4-220ENST00000513578 KCNMB2Q9Y691 235 aa7.36□□□□□ -1.23
RNF4-220ENST00000513578 A0A0A6YYH2 397 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 OR6C6A6NF89 314 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 A6NJ64 397 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 DHRS7CA6NNS2 312 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 SYNGR3O43761 229 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 MRPL33O75394 65 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms