RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 COL7A1Q02388 2944 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 A0A1W2PRG6 482 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 TNFRSF13BO14836 293 aaPredicted RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 LYPD3O95274 346 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 IFNW1P05000 195 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 ACADSP16219 412 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 GSTM3P21266 225 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 KITLGP21583 273 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 RBMXP38159 391 aaKnown RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 SLC27A4Q6P1M0 643 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 TTC33Q6PID6 262 aaPredicted RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 Q6ZR03 302 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 NPEPL1Q8NDH3 523 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 FAM110DQ8TAY7 271 aaPredicted RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 TBC1D15Q8TC07 691 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 ADAMTS16Q8TE57 1224 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 ITLN1Q8WWA0 313 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 ASB10Q8WXI3 467 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 NEIL1Q96FI4 390 aaPredicted RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 NUDT16L1Q9BRJ7 211 aaKnown RBP11.6□□□□□ -0.55
SPCS3-204ENST00000513139 OR2H1Q9GZK4 316 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 TMEM165Q9HC07 324 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 GCM1Q9NP62 436 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 RHCGQ9UBD6 479 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 UGT2A1Q9Y4X1 527 aa11.6□□□□□ -0.55
SPCS3-204ENST00000513139 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 MCIDASD6RGH6 385 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 FFAR1O14842 300 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 TRMUO75648 421 aaKnown RBP11.59□□□□□ -0.55
SPCS3-204ENST00000513139 DIRAS1O95057 198 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 MT-ND1P03886 318 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 SEMG1P04279 462 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 NR2C1P13056 603 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 CDAP32320 146 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 DAP3P51398 398 aaKnown RBP11.59□□□□□ -0.55
SPCS3-204ENST00000513139 FGF12P61328 243 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 ERVK-25P63136 954 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 FLOT2Q14254 428 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 TAF11Q15544 211 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 ZSCAN26Q16670 478 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 NANOGNBQ7Z5D8 188 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 LRGUKQ96M69 825 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 OR2V2Q96R30 315 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 WNT5BQ9H1J7 359 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
SPCS3-204ENST00000513139 TBCCD1Q9NVR7 557 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 NDUFAF4Q9P032 175 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 RIMS3Q9UJD0 308 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 SLC7A7Q9UM01 511 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 A4GNTQ9UNA3 340 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 TIMM10BQ9Y5J6 103 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 ENPP4Q9Y6X5 453 aa11.59□□□□□ -0.55
SPCS3-204ENST00000513139 TRAPPC13A5PLN9 417 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 BLOC1S5-TXNDC5H3BN57 136 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 GPR137BO60478 399 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 CST2P09228 141 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
SPCS3-204ENST00000513139 UGT2B15P54855 530 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 TAS2R41P59536 307 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 PCBD1P61457 104 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 SGCAQ16586 387 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF181Q2M3W8 571 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 SPATA24Q86W54 205 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 NKAIN4Q8IVV8 208 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 ZSCAN4Q8NAM6 433 aaPredicted RBP11.58□□□□□ -0.56
SPCS3-204ENST00000513139 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 NMD3Q96D46 503 aaKnown RBP11.58□□□□□ -0.56
SPCS3-204ENST00000513139 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 TMEM246Q9BRR3 403 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF426Q9BUY5 554 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
SPCS3-204ENST00000513139 NPIPB13A6NJU9 1138 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 AQP12BA6NM10 295 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 NPIPB4C9JG80 1138 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 G3V4G9 280 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 P2RY10O00398 339 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 PHYHO14832 338 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
SPCS3-204ENST00000513139 OR5F1O95221 314 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 SLC2A10O95528 541 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 F13BP05160 661 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 CSF1P09603 554 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 THRBP10828 461 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 UMPSP11172 480 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 PITPNBP48739 271 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 RPL18Q07020 188 aaKnown RBP11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF404Q494X3 552 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 SAMD5Q5TGI4 173 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 C1orf146Q5VVC0 180 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 SYT9Q86SS6 491 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 AQP12AQ8IXF9 295 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ADGRG5Q8IZF4 528 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 CANT1Q8WVQ1 401 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms