RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 BMI1P35226 326 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 SSR4P51571 173 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 UBE2E1P51965 193 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 RPS23P62266 143 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 PRR3P79522 188 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 MRPS22P82650 360 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF181Q2M3W8 571 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 SLC25A35Q3KQZ1 300 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 SP6Q3SY56 376 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 GPR107Q5VW38 600 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 H3F3CQ6NXT2 135 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 DEGS2Q6QHC5 323 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 KDELC1Q6UW63 502 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 DAZ4Q86SG3 579 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 CSGALNACT2Q8N6G5 542 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 LINC00469Q8N7U9 141 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 GPR26Q8NDV2 337 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 IGF2BP2-AS1Q96M15 143 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 DSN1Q9H410 356 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 DUSP21Q9H596 190 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 TRIM45Q9H8W5 580 aaPredicted RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 TMEM27Q9HBJ8 222 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 FGF20Q9NP95 211 aaPredicted RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 DAZ1Q9NQZ3 744 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 IL37Q9NZH6 218 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 LSM7Q9UK45 103 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 MCTS1Q9ULC4 181 aaKnown RBP0.49□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF337Q9Y3M9 751 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 PEX16Q9Y5Y5 336 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 COMMD3-BMI1R4GMX3 469 aa0.49□□□□□ -2.33
PDGFC-208ENST00000512711 VWA8A3KMH1 1905 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 IGKV1-27A0A075B6S5 117 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 GLYATL1P3A0A0U1RQE8 302 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ARHGEF35A5YM69 484 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 BTBD17A6NE02 478 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 LRRIQ3A6PVS8 624 aaPredicted RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 PLPP1O14494 284 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 DYNC1I1O14576 645 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 EIF4E2O60573 245 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 CCDC22O60826 627 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 EEDO75530 441 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 SURF6O75683 361 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 TSPAN12O95859 305 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ARL14EPLP0DKL9 152 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ERGP11308 486 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ATF6P18850 670 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 RBM34P42696 430 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 CSNK1EP49674 416 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 DGCR6Q14129 220 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 OR7A5Q15622 319 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF726P1Q15940 193 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 EXOC3L2Q2M3D2 409 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 CCDC152Q4G0S7 254 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 AMMECR1LQ6DCA0 310 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF470Q6ECI4 717 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 EFL1Q7Z2Z2 1120 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 GTPBP8Q8N3Z3 284 aaPredicted RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 OR1J4Q8NGS1 313 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 OR5B3Q8NH48 314 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 SLC7A13Q8TCU3 470 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 PIBF1Q8WXW3 757 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 GHSRQ92847 366 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 TRIM44Q96DX7 344 aaPredicted RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 IFT74Q96LB3 600 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 OR5B12Q96R08 314 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 TMEM243Q9BU79 118 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 C1orf50Q9BV19 199 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 TMEM106BQ9NUM4 274 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 SUN2Q9UH99 717 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 FARSAQ9Y285 508 aaKnown RBP0.48□□□□□ -2.33
PDGFC-208ENST00000512711 COL6A6A6NMZ7 2263 aa0.48□□□□□ -2.33
PDGFC-208ENST00000512711 C15orf65H3BRN8 121 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 CLDN34H7C241 214 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF208O43345 1280 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 OR7C2O60412 319 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 PEX11AO75192 247 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 SCELO95171 688 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 CPSF4O95639 269 aaKnown RBP0.47□□□□□ -2.33
PDGFC-208ENST00000512711 SERPINA5P05154 406 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 CSRP1P21291 193 aaKnown RBP0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ACAA2P42765 397 aaKnown RBP0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ACOT2P49753 483 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 SEC61GP60059 68 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 POLR2FP61218 127 aaKnown RBP0.47□□□□□ -2.33
PDGFC-208ENST00000512711 KCNJ2P63252 427 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 BIKQ13323 160 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF266Q14584 549 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 QPRTQ15274 297 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 KRTAP21-3Q3LHN1 58 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 HSP90AA5PQ58FG0 334 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 CPTPQ5TA50 214 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 Q6ZSR3 168 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 NIPA1Q7RTP0 329 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 H2BFWTQ7Z2G1 175 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 PRELID2Q8N945 189 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ATP5SQ99766 215 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ERP44Q9BS26 406 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 NT5MQ9NPB1 228 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 ZNF302Q9NR11 478 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 SLC17A7Q9P2U7 560 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms