RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SLC9A3R2Q15599 337 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 C11orf91Q3C1V1 193 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 PTCHD4Q6ZW05 846 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 PIGWQ7Z7B1 504 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 ADCK1Q86TW2 530 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 GJC3Q8NFK1 279 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 OR52J3Q8NH60 311 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-216ENST00000512683 PYURFQ96I23 114 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 RSRC1Q96IZ7 334 aaKnown RBP10.54□□□□□ -0.72
VEGFA-216ENST00000512683 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
VEGFA-216ENST00000512683 NOX4Q9NPH5 578 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 ARL8BQ9NVJ2 186 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 VSX1Q9NZR4 365 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-216ENST00000512683 V9GYQ6 96 aa10.54□□□□□ -0.72
VEGFA-216ENST00000512683 TXNDC12O95881 172 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 LIPFP07098 398 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 CDKN2AP42771 156 aaKnown RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 GATA4P43694 442 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 MMP16P51512 607 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 KRR1Q13601 381 aaKnown RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 OTPQ5XKR4 325 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 KLBQ86Z14 1044 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 PGAM4Q8N0Y7 254 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 BCL6BQ8N143 479 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 PARP8Q8N3A8 854 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 MEGF10Q96KG7 1140 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 C1orf147Q96MC9 270 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 CDRT15Q96T59 188 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 COQ7Q99807 217 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 SLC30A2Q9BRI3 323 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 HDHD2Q9H0R4 259 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 TMEM100Q9NV29 134 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 ASH2LQ9UBL3 628 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 MAGEL2Q9UJ55 1249 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 COA3Q9Y2R0 106 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 NOP16Q9Y3C1 178 aaKnown RBP10.53□□□□□ -0.72
VEGFA-216ENST00000512683 IER3IP1Q9Y5U9 82 aa10.53□□□□□ -0.72
VEGFA-216ENST00000512683 IGHV2-70DA0A0C4DH43 119 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 UNC119BA6NIH7 251 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 IQCF6A8MYZ5 107 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 SOCS2O14508 198 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 KCNAB3O43448 404 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 SLC16A7O60669 478 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 GMNNO75496 209 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 IRF2P14316 349 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 CRABP1P29762 137 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 NPY4RP50391 375 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 RPL15P61313 204 aaKnown RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 GNB2P62879 340 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 GNGT1P63211 74 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 HIST1H3AP68431 136 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 ECH1Q13011 328 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 HIST2H3PS2Q5TEC6 136 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 DNM1P34Q6PK57 102 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 COLCA1Q6ZS62 124 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 HIST2H3AQ71DI3 136 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 OR8B3Q8NGG8 313 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 Q8TCH9 128 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 TMIGD2Q96BF3 282 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF48Q96MX3 618 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 OR8B2Q96RD0 313 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 HCAR1Q9BXC0 346 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 SLC22A4Q9H015 551 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 NUAK2Q9H093 628 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 POFUT1Q9H488 388 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 KRCC1Q9NPI7 259 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-216ENST00000512683 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 AURKCQ9UQB9 309 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 ARL2BPQ9Y2Y0 163 aa10.52□□□□□ -0.73
VEGFA-216ENST00000512683 DCTN6O00399 190 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 PHYHO14832 338 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 ARPC2O15144 300 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 NDUFA2O43678 99 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 GADD45GO95257 159 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 RPS6KA3P51812 740 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 SEC61A1P61619 476 aaKnown RBP10.51□□□□□ -0.73
VEGFA-216ENST00000512683 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-216ENST00000512683 KRT72Q14CN4 511 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 ZNF404Q494X3 552 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-216ENST00000512683 CD276Q5ZPR3 534 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 DCDC5Q6ZRR9 648 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 OR4F5Q8NH21 305 aa10.51□□□□□ -0.73
VEGFA-216ENST00000512683 SLC7A6Q92536 515 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms