RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 DDA1Q9BW61 102 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 CIPCQ9C0C6 399 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARMC7Q9H6L4 198 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 B3GNT2Q9NY97 397 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 KCNE5Q9UJ90 142 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 PACSIN3Q9UKS6 424 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 SCML2Q9UQR0 700 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 GREB1LQ9C091 1923 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 MYH15Q9Y2K3 1946 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 MYH8P13535 1937 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CENPVL1A0A0U1RR11 272 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CENPVL3A0A0U1RRI6 287 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 TCRBV9S1A1TA0A576 114 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 PRRG2O14669 202 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 GPR137BO60478 399 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 NDUFS7O75251 213 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CXCR1P25024 350 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 FASP25445 335 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 TNFSF8P32971 234 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 ARR3P36575 388 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 HOXA1P49639 335 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 PDLIM4P50479 330 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 AP2S1P53680 142 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 NTHL1P78549 312 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZIC1Q15915 447 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 DUSP7Q16829 419 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 LRRC75BQ2VPJ9 315 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 AKIRIN2Q53H80 203 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 RESP18Q5W5W9 173 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM42Q69YG0 159 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 RBM44Q6ZP01 1051 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM135Q86UB9 458 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CPSF7Q8N684 471 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CASTOR1Q8WTX7 329 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 ABCG5Q9H222 651 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 CWH43Q9H720 699 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 GLTPQ9NZD2 209 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 BTNL2Q9UIR0 455 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 PILRBQ9UKJ0 227 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 MGAT4AQ9UM21 535 aa5.4□□□□□ -1.55
TRAPPC11-209ENST00000512476 TCHHQ07283 1943 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SEC14L6B5MCN3 397 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 TCP10L2B9ZVM9 353 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 FCN1O00602 326 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 PHF1O43189 567 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SERPINB7O75635 380 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 MT-CO3P00414 261 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZDHHC11BP0C7U3 371 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 CHATP28329 748 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 RFC3P40938 356 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 INSM1Q01101 510 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 GUSBP1Q15486 140 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 TRIP13Q15645 432 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 TIGITQ495A1 244 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 FKBP1CQ5VVH2 108 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 ASRGL1Q7L266 308 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 PIWIL4Q7Z3Z4 852 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 LGI3Q8N145 548 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 IQCF1Q8N6M8 205 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 HAVCR2Q8TDQ0 301 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 FAM151AQ8WW52 585 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 IRF7Q92985 503 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZBED6CLQ96FA7 236 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 PECRQ9BY49 303 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SHARPINQ9H0F6 387 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 TMEM181Q9P2C4 612 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SEC14L4Q9UDX3 406 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 Q9UF83 564 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SS18L2Q9UHA2 77 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 R4GN57 208 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 A0A1B0GTI1 187 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR5K3A6NET4 321 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 RNASET2O00584 256 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 PFDN6O15212 129 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 CDH11P55287 796 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 CLDN6P56747 220 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 BACE1P56817 501 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 ELAVL1Q15717 326 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 SYT6Q5T7P8 510 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 PRELID2Q8N945 189 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 OR8J3Q8NGG0 315 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 OXGR1Q96P68 337 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 CLCC1Q96S66 551 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 CHIAQ9BZP6 476 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 NXF2Q9GZY0 626 aaKnown RBP5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 TAS2R13Q9NYV9 303 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 STUB1Q9UNE7 303 aa5.39□□□□□ -1.55
TRAPPC11-209ENST00000512476 RP2O75695 350 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ISG15P05161 165 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 CELA2BP08218 269 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 H2BFMP0C1H6 154 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 RPL4P36578 427 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 NR4A2P43354 598 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 RAB7AP51149 207 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 RPL27P61353 136 aaKnown RBP5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 ZNF235Q14590 738 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 POU2AF1Q16633 256 aa5.38□□□□□ -1.55
TRAPPC11-209ENST00000512476 RPL13AP3Q6NVV1 102 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms