RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MFSD8Q8NHS3 518 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ADAMTS16Q8TE57 1224 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 NR1H4Q96RI1 486 aaPredicted RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
NUP54-211ENST00000512151 SH3GL3Q99963 347 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 PRSS27Q9BQR3 290 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 CHID1Q9BWS9 393 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 BCL2L14Q9BZR8 327 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 TRIM15Q9C019 465 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 MAGIXQ9H6Y5 334 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 EVA1AQ9H8M9 152 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 IL1RAPQ9NPH3 570 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ACOXLQ9NUZ1 547 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 VNN3Q9NY84 501 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 FBLN5Q9UBX5 448 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 RIMS3Q9UJD0 308 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 FBXL3Q9UKT7 428 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 AURKCQ9UQB9 309 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 ENPP4Q9Y6X5 453 aa7.54□□□□□ -1.2
NUP54-211ENST00000512151 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 A0A0B4J2E0 115 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 IGHV1-69DA0A0B4J2H0 117 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 A0A1B0GX12 115 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 MS4A18H0YCH9 400 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 FMO6PO60774 539 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 TIPRLO75663 272 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 IFNW1P05000 195 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 RAP2AP10114 183 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 RPS2P15880 293 aaKnown RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 GABRA5P31644 462 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 PPP1R8Q12972 351 aaKnown RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 MS4A18Q3C1V0 323 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 FAM98BQ52LJ0 330 aaKnown RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 WBP2NLQ6ICG8 309 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 PIWIL3Q7Z3Z3 882 aaKnown RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 RANBP3LQ86VV4 465 aaPredicted RBP7.53□□□□□ -1.2
NUP54-211ENST00000512151 NKAIN4Q8IVV8 208 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 OR4S1Q8NGB4 309 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 PPP1R35Q8TAP8 253 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 SLC38A4Q969I6 547 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 R3HDM4Q96D70 268 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 LRR1Q96L50 414 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 PRRC1Q96M27 445 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 ULBP2Q9BZM5 246 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 SEMA6AQ9H2E6 1030 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 TMEM27Q9HBJ8 222 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 MAN2C1Q9NTJ4 1040 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 SLC7A7Q9UM01 511 aa7.53□□□□□ -1.2
NUP54-211ENST00000512151 IGKV1D-42A0A075B6H8 117 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 PLSCR5A0PG75 271 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TRAPPC13A5PLN9 417 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 MAGEA13PA6NCF6 341 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 P2RY10O00398 339 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 OR5F1O95221 314 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 AHSA1O95433 338 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 RHCEP18577 417 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 CBLP22681 906 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 PEX2P28328 305 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 GRPRP30550 384 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TAS2R41P59536 307 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 DMRTC1Q5HYR2 192 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 MBNL2Q5VZF2 373 aaKnown RBP7.52□□□□□ -1.21
NUP54-211ENST00000512151 LPCAT4Q643R3 524 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 SLC27A4Q6P1M0 643 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 ZNF613Q6PF04 617 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 ULK3Q6PHR2 472 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TBPL2Q6SJ96 375 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TMEM179BQ7Z7N9 219 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 GALNT4Q8N4A0 578 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 SLC22A24Q8N4F4 322 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 SLC25A40Q8TBP6 338 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 KLF14Q8TD94 323 aaPredicted RBP7.52□□□□□ -1.21
NUP54-211ENST00000512151 STK35Q8TDR2 534 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 LRTOMTQ8WZ04 291 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 TAAR8Q969N4 342 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 SLC41A3Q96GZ6 507 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 FUZQ9BT04 418 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 OR2J1Q9GZK6 312 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 YY1AP1Q9H869 796 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 ARMC1Q9NVT9 282 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 VPREB3Q9UKI3 123 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 AP4S1Q9Y587 144 aa7.52□□□□□ -1.21
NUP54-211ENST00000512151 A0A087WUJ7 227 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 LOC102725191A0A1B0GVB3 256 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 A6NHS1 94 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 H0YJX3 145 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 CHP2O43745 196 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 CD28P10747 220 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 UQCRBP14927 111 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 RRM2P31350 389 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 RPL4P36578 427 aaKnown RBP7.51□□□□□ -1.21
NUP54-211ENST00000512151 TGFBR2P37173 567 aa7.51□□□□□ -1.21
NUP54-211ENST00000512151 PITPNBP48739 271 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms