RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 HLA-DQB2P05538 268 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PIRTP0C851 137 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TRAPPC2P0DI81 140 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TRAPPC2BP0DI82 140 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FSTP19883 344 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CA4P22748 312 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 NBL1P41271 181 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 VEGFCP49767 419 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 DLX5P56178 289 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 LOXL3P58215 753 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB2AP61019 212 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SNRPD1P62314 119 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TIAL1Q01085 375 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF91Q05481 1191 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 MAD2L1BPQ15013 274 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PAFAH1B3Q15102 231 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSPB2Q16082 182 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HLA-BQ31612 363 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SMIM21Q3B7S5 101 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARHGAP11BQ3KRB8 267 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 C9orf135Q5VTT2 229 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CASP12Q6UXS9 341 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF111Q6ZNA4 994 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMPRSS11BQ86T26 416 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD163Q86VB7 1156 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF547Q8IVP9 402 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CPNE9Q8IYJ1 553 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PARP16Q8N5Y8 322 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR11H1Q8NG94 326 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR56A4Q8NGH8 313 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR11H2Q8NH07 326 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR5AK3PQ8NH89 298 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPATA22Q8NHS9 363 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TFB1MQ8WVM0 346 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TNFAIP8L1Q8WVP5 186 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPEQ96AT9 228 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CENPNQ96H22 339 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF582Q96NG8 517 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SDHCQ99643 169 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM121Q9BTD3 319 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 C6orf106Q9H6K1 298 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CXorf21Q9HAI6 301 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RETNQ9HD89 108 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 LHX3Q9UBR4 397 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR14J1Q9UGF5 321 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 STEAP1Q9UHE8 339 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FBXO4Q9UKT5 387 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 KMT2EQ8IZD2 1858 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SHROOM3Q8TF72 1996 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CELSR3Q9NYQ7 3312 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGHV1OR15-9A0A0B4J2B8 117 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1B0GTI1 187 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 LRRC30A6NM36 301 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 GJE1A6NN92 205 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 C21orf140B9A014 251 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FTCDNL1E5RQL4 147 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 BLOC1S5-TXNDC5H3BN57 136 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 APOC4-APOC2K7ER74 178 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDIPTO14735 213 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TNFSF11O14788 317 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PHYHO14832 338 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FFAR3O14843 346 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC31A1O15431 190 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR42O15529 346 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 DIRAS1O95057 198 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 MPZL1O95297 269 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PTTG1O95997 202 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HLA-HP01893 362 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 APOC2P02655 101 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ALDOCP09972 364 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 IL7P13232 177 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TDGF1P13385 188 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CBLP22681 906 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 DRD3P35462 400 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARR3P36575 388 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HLCSP50747 726 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RRADP55042 308 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMBIM6P55061 237 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ERVPABLB-1P60509 514 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAP1BP61224 184 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HHEXQ03014 270 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 BCL2L1Q07817 233 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF74Q16587 644 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TBR1Q16650 682 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF658BQ4V348 819 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FBXW9Q5XUX1 488 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SCIMPQ6UWF3 145 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF517Q6ZMY9 492 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 AMIGO1Q86WK6 493 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SMIM20Q8N5G0 67 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR4F15Q8NGB8 312 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR4L1Q8NH43 312 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 GPR151Q8TDV0 419 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SCRN2Q96FV2 425 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TBX5Q99593 518 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 LHPPQ9H008 270 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 DPAGT1Q9H3H5 408 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ACSS3Q9H6R3 686 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SAP30LQ9HAJ7 183 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms