RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 PDZK1P1A8MUH7 402 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 YIF1AO95070 293 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 IGKV3-11P04433 115 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 IL32P24001 234 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 RFC3P40938 356 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 LOXL1Q08397 574 aaPredicted RBP3.4□□□□□ -1.87
CHD1-206ENST00000511067 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 SLAQ13239 276 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 ART3Q13508 389 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 RCAN2Q14206 197 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
CHD1-206ENST00000511067 FHOD3Q2V2M9 1422 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 FAM78AQ5JUQ0 283 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 Q5W150 140 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 NANOGP8Q6NSW7 305 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 NTM-AS1Q6ZSK4 140 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 FAM184AQ8NB25 1140 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 TIMM17AQ99595 171 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 FOXC2Q99958 501 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 CALN1Q9BXU9 219 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 MED4Q9NPJ6 270 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 ZNF282Q9UDV7 671 aaPredicted RBP3.4□□□□□ -1.87
CHD1-206ENST00000511067 HYOU1Q9Y4L1 999 aa3.4□□□□□ -1.87
CHD1-206ENST00000511067 ANKRD12Q6UB98 2062 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 BET1O15155 118 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 B4GALT5O43286 388 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 AKR7A2O43488 359 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 XRCC2O43543 280 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 ZNF324O75467 553 aaPredicted RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 SEMA3DO95025 777 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 POLR2MP0CAP2 368 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 ZNF32P17041 273 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 CD82P27701 267 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 NBL1P41271 181 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 UBE2MP61081 183 aaKnown RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 RPS15AP62244 130 aaKnown RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 TCEAL5Q5H9L2 206 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 Q6ZR03 302 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 HORMAD1Q86X24 394 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 CALHM1Q8IU99 346 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 INO80EQ8NBZ0 244 aaPredicted RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 OR11H7Q8NGC8 314 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 COQ8AQ8NI60 647 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 RGP1Q92546 391 aaPredicted RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 TCEAL3Q969E4 200 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 RPEQ96AT9 228 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 BTN2A3PQ96KV6 586 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 BLZF1Q9H2G9 400 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 EDA2RQ9HAV5 297 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 ZNF355PQ9NSJ1 428 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 SLC39A1Q9NY26 324 aa3.39□□□□□ -1.87
CHD1-206ENST00000511067 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 GPATCH8Q9UKJ3 1502 aaKnown RBP3.39□□□□□ -1.87
CHD1-206ENST00000511067 IGLV4-60A0A075B6I1 120 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 GCM2O75603 506 aaPredicted RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 TACSTD2P09758 323 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 USF1P22415 310 aaPredicted RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 PFN2P35080 140 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 FABP6P51161 128 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 RPS23P62266 143 aaKnown RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 DNAJC3Q13217 504 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 TTC19Q6DKK2 380 aaPredicted RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 PRMT9Q6P2P2 845 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 WDR82Q6UXN9 313 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 C12orf54Q6X4T0 127 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 FAM122BQ7Z309 247 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 WDR86Q86TI4 376 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 RIMKLAQ8IXN7 391 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 UBALD2Q8IYN6 164 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 VKORC1L1Q8N0U8 176 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 PTX4Q96A99 478 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 NARS2Q96I59 477 aaKnown RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 RNF145Q96MT1 663 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 ZNF382Q96SR6 550 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 GPR21Q99679 349 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 ZNF430Q9H8G1 570 aaPredicted RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 ZC4H2Q9NQZ6 224 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 YARS2Q9Y2Z4 477 aaKnown RBP3.38□□□□□ -1.87
CHD1-206ENST00000511067 TSPOAP1O95153 1857 aa3.38□□□□□ -1.87
CHD1-206ENST00000511067 IGHV1OR15-9A0A0B4J2B8 117 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 SYCE1LA8MT33 242 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 ZNF705GA8MUZ8 300 aaPredicted RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 H7C1H1 209 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 NME4O00746 187 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 BPY2O14599 106 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 TRDMT1O14717 391 aaKnown RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 RAD51BO15315 384 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 NVLO15381 856 aaKnown RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 ERI3O43414 337 aaKnown RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 VAMP5O95183 116 aa3.37□□□□□ -1.87
CHD1-206ENST00000511067 WISP3O95389 354 aaPredicted RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 RBM34P42696 430 aaKnown RBP3.37□□□□□ -1.87
CHD1-206ENST00000511067 SLC11A1P49279 550 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms