RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PKP2Q99959 881 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 TEX12Q9BXU0 123 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 GABARAPL1Q9H0R8 117 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 PURGQ9UJV8 347 aaKnown RBP11.91□□□□□ -0.5
DDX41-212ENST00000511040 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
DDX41-212ENST00000511040 ZANQ9Y493 2812 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 LRP5LA4QPB2 252 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 H3BNX3 289 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 H3BSA7 217 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 SELENOFO60613 162 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 GLCEO94923 617 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 LCATP04180 440 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 SLC6A9P48067 706 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 RGS6P49758 472 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 BLVRAP53004 296 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 RPS7P62081 194 aaKnown RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 LOXL1Q08397 574 aaPredicted RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 HNRNPA0Q13151 305 aaKnown RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 PTGES3Q15185 160 aaKnown RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 TAF13Q15543 124 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 TRIP10Q15642 601 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 PCGF3Q3KNV8 242 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 SPRNQ5BIV9 151 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 CXXC5Q7LFL8 322 aaKnown RBP11.9□□□□□ -0.5
DDX41-212ENST00000511040 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 RDH5Q92781 318 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 HAVCR1Q96D42 359 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 SLAMF6Q96DU3 332 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 COPS4Q9BT78 406 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 DECR2Q9NUI1 292 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 N6AMT1Q9Y5N5 214 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
DDX41-212ENST00000511040 M0R135 149 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 RRP9O43818 475 aaKnown RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 PRKYO43930 277 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 KITLGP21583 273 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 ANOS1P23352 680 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 IGFBP5P24593 272 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 GIFP27352 417 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 NAA10P41227 235 aaPredicted RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 PRKXP51817 358 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 TPTEP56180 551 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 ESRRGP62508 458 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 RIN1Q13671 783 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 PCK2Q16822 640 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 TEX30Q5JUR7 227 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 KDM4DQ6B0I6 523 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 Q6ZR03 302 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 USP51Q70EK9 711 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 DPY19L4Q7Z388 723 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 ST7LQ8TDW4 575 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 SPTSSAQ969W0 71 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 COG8Q96MW5 612 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 AMELYQ99218 206 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 CIB1Q99828 191 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 C1QTNF5Q9BXJ0 243 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 NARFLQ9H6Q4 476 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
DDX41-212ENST00000511040 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 DDX28Q9NUL7 540 aaKnown RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 TMEFF2Q9UIK5 374 aaPredicted RBP11.89□□□□□ -0.51
DDX41-212ENST00000511040 ABCA1O95477 2261 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 INAFM1C9JVW0 142 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
DDX41-212ENST00000511040 LILRA1O75019 489 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 SLC2A1P11166 492 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 RAC2P15153 192 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 SLC2A5P22732 501 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 TUBG1P23258 451 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 POLR2IP36954 125 aaKnown RBP11.88□□□□□ -0.51
DDX41-212ENST00000511040 APOFQ13790 326 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 SNAI3Q3KNW1 292 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
DDX41-212ENST00000511040 TIGD4Q8IY51 512 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 BHLHE23Q8NDY6 225 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 OR2Z1Q8NG97 314 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
DDX41-212ENST00000511040 ABHD6Q9BV23 337 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 CHODLQ9H9P2 273 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 TUBG2Q9NRH3 451 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 CYSLTR2Q9NS75 346 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 NKIRAS2Q9NYR9 191 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 KLHDC2Q9Y2U9 406 aa11.88□□□□□ -0.51
DDX41-212ENST00000511040 YLPM1P49750 1951 aaKnown RBP11.87□□□□□ -0.51
DDX41-212ENST00000511040 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 CCDC182A6NF36 153 aa11.87□□□□□ -0.51
DDX41-212ENST00000511040 ZAR1LA6NP61 321 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms