RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ACOD1A6NK06 481 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 H0YIV9 168 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 M0R233 179 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 H6PDO95479 791 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 OXSR1O95747 527 aaPredicted RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 MELTFP08582 738 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CRYBB2P43320 205 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 MAGEA6P43360 314 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 KCNJ1P48048 391 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 TMEM50BP56557 158 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CSNK2BP67870 215 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CYCSP99999 105 aaKnown RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 TGFBR3Q03167 851 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 OR4D1Q15615 310 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CD226Q15762 336 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CDKL4Q5MAI5 379 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 FAM205BPQ63HN1 556 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 KRT80Q6KB66 452 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CBLN3Q6UW01 205 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 C4orf22Q6V702 233 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 BRD3OSQ6XYD6 125 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CATSPERDQ86XM0 798 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 CNTN4Q8IWV2 1026 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 PARP8Q8N3A8 854 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 OR10S1Q8NGN2 331 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 PIK3R3Q92569 461 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 BCL2L2Q92843 193 aaPredicted RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 CMTM3Q96MX0 182 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 OR5B2Q96R09 309 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 MRPL1Q9BYD6 325 aaKnown RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 FRMD8P1Q9BZ68 369 aaPredicted RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 DPAGT1Q9H3H5 408 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 MUC13Q9H3R2 512 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 EMC3Q9P0I2 261 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 RPUSD1Q9UJJ7 312 aaKnown RBP4.84□□□□□ -1.63
USP53-206ENST00000510737 PSME2Q9UL46 239 aa4.84□□□□□ -1.63
USP53-206ENST00000510737 STAB2Q8WWQ8 2551 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 IGHV2OR16-5A0A0B4J2B6 119 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 ZNF816-ZNF321PA0A0X1KG74 233 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 FOXH1O75593 365 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 MLNP12872 115 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 IGLL1P15814 213 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 GABRA3P34903 492 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 MAGEA3P43357 314 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 ASMTP46597 345 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 MAPK12P53778 367 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 TAS2R39P59534 338 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 CCL8P80075 99 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 SNTB2Q13425 540 aaKnown RBP4.83□□□□□ -1.64
USP53-206ENST00000510737 HERPUD1Q15011 391 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 LIPJQ5W064 366 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 REP15Q6BDI9 236 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 TMPPEQ6ZT21 453 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 METTL4Q8N3J2 472 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 TMEM86BQ8N661 226 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 OR1K1Q8NGR3 316 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 GPR119Q8TDV5 335 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 UPRTQ96BW1 309 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 ARL5BQ96KC2 179 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 BTBD10Q9BSF8 475 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 ZNF385DQ9H6B1 395 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 NOX3Q9HBY0 568 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 CD274Q9NZQ7 290 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 MRTO4Q9UKD2 239 aaKnown RBP4.83□□□□□ -1.64
USP53-206ENST00000510737 RNF11Q9Y3C5 154 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 WNK2Q9Y3S1 2297 aa4.83□□□□□ -1.64
USP53-206ENST00000510737 ARPC4-TTLL3A0A0A6YYG9 625 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 ANKRD61A6NGH8 418 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 K7EPI3 171 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 KIF2AO00139 706 aaPredicted RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 SULT2B1O00204 365 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 UPK1AO00322 258 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 GPR171O14626 319 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 TSPAN9O75954 239 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 SEMA3DO95025 777 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 WISP3O95389 354 aaPredicted RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 PSMG1O95456 288 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 LGI1O95970 557 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 IGHMP01871 453 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 SFTPBP07988 381 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 CBR1P16152 277 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 PAX7P23759 505 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 PSMD4P55036 377 aaKnown RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 UBE2NP61088 152 aaKnown RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 ZNF117Q03924 483 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 CRYMQ14894 314 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 ALKBH6Q3KRA9 238 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 CASP12Q6UXS9 341 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 RAPH1Q70E73 1250 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 RTN4RL2Q86UN3 420 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 ARHGAP24Q8N264 748 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 TEX9Q8N6V9 391 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 ZIC4Q8N9L1 334 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 WFDC9Q8NEX5 89 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 ST7LQ8TDW4 575 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 RAB1CQ92928 201 aa4.82□□□□□ -1.64
USP53-206ENST00000510737 EXOSC8Q96B26 276 aaKnown RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 TRIM44Q96DX7 344 aaPredicted RBP4.82□□□□□ -1.64
USP53-206ENST00000510737 DNAJA3Q96EY1 480 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms