RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GUCA1AP43080 201 aaPredicted RBP13.23□□□□□ -0.29
RAB40C-202ENST00000509637 OMPP47874 163 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 RAD23AP54725 363 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 GNB2P62879 340 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 LRRN1Q6UXK5 716 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 CBLL1Q75N03 491 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 MUC20Q8N307 709 aaPredicted RBP13.23□□□□□ -0.29
RAB40C-202ENST00000509637 OR13G1Q8NGZ3 307 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 RCN3Q96D15 328 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
RAB40C-202ENST00000509637 TBX15Q96SF7 602 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 NUDT16L1Q9BRJ7 211 aaKnown RBP13.23□□□□□ -0.29
RAB40C-202ENST00000509637 FUZQ9BT04 418 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 CHIAQ9BZP6 476 aa13.23□□□□□ -0.29
RAB40C-202ENST00000509637 NOTCH1P46531 2555 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 IGLV1-36A0A0B4J1U3 117 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 NME4O00746 187 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 SURF4O15260 269 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 AHCYL1O43865 530 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 MMP9P14780 707 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 PSMB10P40306 273 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 MTNR1AP48039 350 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 ZNF181Q2M3W8 571 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 C8orf82Q6P1X6 216 aaPredicted RBP13.22□□□□□ -0.29
RAB40C-202ENST00000509637 Q6YL49 198 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 CFAP77Q6ZQR2 320 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.22□□□□□ -0.29
RAB40C-202ENST00000509637 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 HSH2DQ96JZ2 352 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 GPX7Q96SL4 187 aaPredicted RBP13.22□□□□□ -0.29
RAB40C-202ENST00000509637 RASSF4Q9H2L5 321 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
RAB40C-202ENST00000509637 ARMCX1Q9P291 453 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
RAB40C-202ENST00000509637 TRBV4-1A0A0J9YWV2 114 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-202ENST00000509637 SRRM5B3KS81 715 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 CXCR6O00574 342 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FAM20BO75063 409 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 SASH3O75995 380 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FSTL3O95633 263 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 ZNF682O95780 498 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 TXNDC12O95881 172 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 IFNW1P05000 195 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 ACSM4P0C7M7 580 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 PSKH1P11801 424 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 NCK1P16333 377 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 SDHAP31040 664 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 PITPNBP48739 271 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-202ENST00000509637 LIPEQ05469 1076 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FIP1L1Q6UN15 594 aaKnown RBP13.21□□□□□ -0.29
RAB40C-202ENST00000509637 OR6V1Q8N148 313 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FGFRL1Q8N441 504 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 CITED1Q99966 193 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.29
RAB40C-202ENST00000509637 CENPVL3A0A0U1RRI6 287 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 BBIP1A8MTZ0 92 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 XKRYO14609 159 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 DIRAS1O95057 198 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 NDUFB2O95178 105 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 SERPINA1P01009 418 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 MELTFP08582 738 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 GATA4P43694 442 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-202ENST00000509637 IFI44LQ53G44 452 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 APOBEC3DQ96AK3 386 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-202ENST00000509637 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-202ENST00000509637 COQ7Q99807 217 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 SIKE1Q9BRV8 207 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 UFSP2Q9NUQ7 469 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 NDUFAF4Q9P032 175 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 RPS6KA6Q9UK32 745 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 B9D1Q9UPM9 204 aa13.2□□□□□ -0.3
RAB40C-202ENST00000509637 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 PPP1R3DO95685 299 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 FPR3P25089 353 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 CFHR2P36980 270 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 SRP9P49458 86 aaKnown RBP13.19□□□□□ -0.3
RAB40C-202ENST00000509637 GSK3BP49841 420 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 RAG2P55895 527 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 COX10Q12887 443 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 OCLNQ16625 522 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 SFRP4Q6FHJ7 346 aaPredicted RBP13.19□□□□□ -0.3
RAB40C-202ENST00000509637 ASPHD2Q6ICH7 369 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 SLC18B1Q6NT16 456 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 SLC26A10Q8NG04 563 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 Q8TCH9 128 aa13.19□□□□□ -0.3
RAB40C-202ENST00000509637 RSRC1Q96IZ7 334 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms