RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR8B12Q8NGG6 310 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 OR6F1Q8NGZ6 308 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 SMIM4Q8WVI0 70 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 HAVCR1Q96D42 359 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 MFRPQ9BY79 579 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
PHF3-209ENST00000509330 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
PHF3-209ENST00000509330 TRAV18A0A075B6X5 111 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 B4GALT1P15291 398 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 CNR1P21554 472 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 SLC6A1P30531 599 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 DCTDP32321 178 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 MMP16P51512 607 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 RAC3P60763 192 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
PHF3-209ENST00000509330 HIST3H3Q16695 136 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 ZNF704Q6ZNC4 412 aaPredicted RBP13.14□□□□□ -0.31
PHF3-209ENST00000509330 ZNF627Q7L945 461 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 OR1J2Q8NGS2 313 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 ADAMTS17Q8TE56 1095 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 FLVCR2Q9UPI3 526 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 CSAG2Q9Y5P2 127 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 DHHO43323 396 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 CALCBP10092 127 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 ACHEP22303 614 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 HTR2CP28335 458 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 TMEM244Q5VVB8 128 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 TMEM123Q8N131 208 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 OR4D6Q8NGJ1 314 aa13.14□□□□□ -0.31
PHF3-209ENST00000509330 PNRC2Q9NPJ4 139 aaKnown RBP13.14□□□□□ -0.31
PHF3-209ENST00000509330 TMEM272A0A1B0GTI8 110 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 GJE1A6NN92 205 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 ARSBP15848 533 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 MSR1P21757 451 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 FKBP2P26885 142 aaKnown RBP13.13□□□□□ -0.31
PHF3-209ENST00000509330 KCNJ8Q15842 424 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 PHF21AQ96BD5 680 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CACNG6Q9BXT2 260 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
PHF3-209ENST00000509330 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
PHF3-209ENST00000509330 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 DOCK7Q96N67 2140 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 A0A1B0GVI7 797 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CENPXA8MT69 81 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CTAG2O75638 210 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
PHF3-209ENST00000509330 GLT8D1Q68CQ7 371 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 ELMOD2Q8IZ81 293 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CYYR1Q96J86 154 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 ST6GAL2Q96JF0 529 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHF3-209ENST00000509330 FREM1Q5H8C1 2179 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
PHF3-209ENST00000509330 SLC17A2O00624 439 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 NKX2-8O15522 239 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
PHF3-209ENST00000509330 PLA1AQ53H76 456 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 SFRP5Q5T4F7 317 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 DTX1Q86Y01 620 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 FCAMRQ8WWV6 532 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 TTTY12Q9BZ98 90 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 ZNF275Q9NSD4 429 aaPredicted RBP13.12□□□□□ -0.31
PHF3-209ENST00000509330 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 KRT33AO76009 404 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 VAMP5O95183 116 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
PHF3-209ENST00000509330 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 ACBD4Q8NC06 268 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 NELFAQ9H3P2 528 aa13.12□□□□□ -0.31
PHF3-209ENST00000509330 ZNF703Q9H7S9 590 aaPredicted RBP13.12□□□□□ -0.31
PHF3-209ENST00000509330 TCRBP04435 133 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 ZNF20P17024 532 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 IGFBP3P17936 291 aaPredicted RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 KLF9Q13886 244 aaPredicted RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 MOGAT2Q3SYC2 334 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 OR5D18Q8NGL1 313 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 NABP1Q96AH0 204 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 PGAM5Q96HS1 289 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 CNTD2Q9H8S5 307 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms