RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SOX7Q9BT81 388 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 GABARAPL3Q9BY60 117 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 MARCH7Q9H992 704 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 DCAF16Q9NXF7 216 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 CYB5R1Q9UHQ9 305 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 KCNG2Q9UJ96 466 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 CACNG2Q9Y698 323 aa6.15□□□□□ -1.42
TOPBP1-207ENST00000509162 SONP18583 2426 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-207ENST00000509162 C5orf49A4QMS7 147 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 EI24O14681 340 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 WNT9BO14905 357 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 SGCEO43556 437 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 IDH3BO43837 385 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 TMCC2O75069 709 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 E2F6O75461 281 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 RP2O75695 350 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 FARS2O95363 451 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 HPXP02790 462 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 ADRA2AP08913 450 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF250P15622 560 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 RAB6AP20340 208 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 GSTM3P21266 225 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 IL2RGP31785 369 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 OTX1P32242 354 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 MAGEB1P43366 347 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 LSM6P62312 80 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 HOXA4Q00056 320 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 HSF2Q03933 536 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 SCRN3Q0VDG4 424 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 CLEC12BQ2HXU8 276 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 TBC1D28Q2M2D7 210 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 SNAI3Q3KNW1 292 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 AGAP6Q5VW22 663 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 SLX4IPQ5VYV7 408 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 RPL13AP3Q6NVV1 102 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 PLBD1Q6P4A8 553 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 PRSS57Q6UWY2 283 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 COLCA1Q6ZS62 124 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 PRSS45Q7RTY3 260 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 NAA40Q86UY6 237 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 LINC00471Q8N535 108 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 OR10H5Q8NGA6 315 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 OR52L1Q8NGH7 329 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 ABHD4Q8TB40 342 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 TEX47Q8TBZ9 253 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 FNDC8Q8TC99 324 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 C10orf105Q8TEF2 133 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 FBLIM1Q8WUP2 373 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 ZMYND19Q96E35 227 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 OR2J1Q9GZK6 312 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 CXorf56Q9H5V9 222 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 RNF121Q9H920 327 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 TCF7L1Q9HCS4 588 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 CCNB1IP1Q9NPC3 277 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 PAPOLBQ9NRJ5 636 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 DDX28Q9NUL7 540 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 FBXL3Q9UKT7 428 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 COPS3Q9UNS2 423 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 AP4S1Q9Y587 144 aa6.14□□□□□ -1.43
TOPBP1-207ENST00000509162 IGHV4-61A0A0C4DH41 118 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 C12orf71A8MTZ7 269 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 B9A039 149 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 H3BN98 237 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 SSX4O60224 188 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 RENP00797 406 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 ALPLP05186 524 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 ACSM4P0C7M7 580 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 COX5BP10606 129 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 NR2C1P13056 603 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF23P17027 643 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 CCNOP22674 350 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 POU1F1P28069 291 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 PCSK6P29122 969 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 CRABP1P29762 137 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 CRISP1P54107 249 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 UCP2P55851 309 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 HLXQ14774 488 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 PTGES3Q15185 160 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 TRIP10Q15642 601 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 KLHL12Q53G59 568 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 AADACL4Q5VUY2 407 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 SHEQ5VZ18 495 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 SLC27A4Q6P1M0 643 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 DPPA2Q7Z7J5 298 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 ATG16L2Q8NAA4 619 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 PROKR2Q8NFJ6 384 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 OR1J1Q8NGS3 322 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 OR1F12Q8NHA8 337 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 KLF14Q8TD94 323 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 NRBF2Q96F24 287 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 COQ7Q99807 217 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 SLC29A1Q99808 456 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 OSBPL10Q9BXB5 764 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 FGF23Q9GZV9 251 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 PPP1R3EQ9H7J1 279 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 CDH20Q9HBT6 801 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 MOV10Q9HCE1 1003 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 S100A14Q9HCY8 104 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 PLEK2Q9NYT0 353 aa6.13□□□□□ -1.43
TOPBP1-207ENST00000509162 USE1Q9NZ43 259 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms