RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SIAEQ9HAT2 523 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CRLF2Q9HC73 371 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 NGBQ9NPG2 151 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 TBCCD1Q9NVR7 557 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 FBXL3Q9UKT7 428 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 AMDHD2Q9Y303 409 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ADAM18Q9Y3Q7 739 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 HSPE1-MOB4S4R3N1 261 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 PRR14LQ5THK1 2151 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ADGRG4Q8IZF6 3080 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 PLCE1Q9P212 2302 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 COL12A1Q99715 3063 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ROS1P08922 2347 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 LOC100130705A0A1B0GUX0 176 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR5H1A6NKK0 313 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PRR23D1E9PI22 279 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 MGST3O14880 152 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 RGS10O43665 173 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC16A7O60669 478 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 MITFO75030 526 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TMCC2O75069 709 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 UBL3O95164 117 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PTHP01270 115 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PRR23D2P0DMB1 279 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 IGFBP2P18065 325 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 MSR1P21757 451 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 LAP3P28838 519 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 GGT2P36268 569 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 VHLP40337 213 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 UBE2NP61088 152 aaKnown RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PCBD1P61457 104 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 EFNB1P98172 346 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 HSF2Q03933 536 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 RUNX1T1Q06455 604 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SRSF1Q07955 248 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 FAM27E3Q08E93 113 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 GABRA6Q16445 453 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC36A2Q495M3 483 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF362Q5T0B9 420 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 MEDAGQ5VYS4 303 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NXNL2Q5VZ03 156 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 CARD17Q5XLA6 110 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 LPCAT4Q643R3 524 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 LEG1Q6P5S2 330 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 KLHL24Q6TFL4 600 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF813Q6ZN06 617 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 BHLHA15Q7RTS1 189 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 DTX2Q86UW9 622 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 GID4Q8IVV7 300 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SYT14Q8NB59 555 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ACBD4Q8NC06 268 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC37A3Q8NCC5 494 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR1K1Q8NGR3 316 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR4K13Q8NH42 304 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 FAM222BQ8WU58 562 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 BCL2L2Q92843 193 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 RFKQ969G6 155 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 RASD2Q96D21 266 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 Q96MT0 163 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ALKBH3Q96Q83 286 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NMNAT3Q96T66 252 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 MYCBPQ99417 103 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 PITX2Q99697 317 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NMNAT2Q9BZQ4 307 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NUAK2Q9H093 628 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 SYT4Q9H2B2 425 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 C1orf198Q9H425 327 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TOR3AQ9H497 397 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 RIBC2Q9H4K1 309 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TRIM36Q9NQ86 728 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TMEM38BQ9NVV0 291 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 FAM118AQ9NWS6 357 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 IMPAD1Q9NX62 359 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 HAO2Q9NYQ3 351 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF226Q9NYT6 803 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TVP23BQ9NYZ1 205 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 NKX1-2Q9UD57 310 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 IL20RAQ9UHF4 553 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 B9D1Q9UPM9 204 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 GMPPBQ9Y5P6 360 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 TENM4Q6N022 2769 aa4.78□□□□□ -1.64
HMGB1P44-201ENST00000508597 IGLV1-36A0A0B4J1U3 117 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 NKX2-6A6NCS4 301 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR6C68A6NDL8 312 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TUBAL3A6NHL2 446 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 C12orf71A8MTZ7 269 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 PRSS44E7EML9 344 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 DLGAP1O14490 977 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 CASKO14936 926 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 TLX2O43763 284 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 RAD51DO75771 328 aa4.77□□□□□ -1.65
HMGB1P44-201ENST00000508597 GLCEO94923 617 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms