RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 PYDC1Q8WXC3 89 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 SAMD8Q96LT4 415 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 FN3KQ9H479 309 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 TUBG2Q9NRH3 451 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 TMEM106BQ9NUM4 274 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 PTTG3PQ9NZH4 202 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 OPN4Q9UHM6 478 aa13.67□□□□□ -0.22
LMNA-222ENST00000508500 ISPDA4D126 451 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 OR6C68A6NDL8 312 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 H0YL77 283 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 H3BNX3 289 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 FSHBP01225 129 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 RAC2P15153 192 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 FPR3P25089 353 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 SEC61A1P61619 476 aaKnown RBP13.66□□□□□ -0.22
LMNA-222ENST00000508500 LCN2P80188 198 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 SLC3A1Q07837 685 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 COX10Q12887 443 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 KRTAP27-1Q3LI81 207 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 ZMAT1Q5H9K5 638 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 ZBTB46Q86UZ6 589 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 LINC00346Q8IVM7 164 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 PQLC1Q8N2U9 271 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 SLC26A10Q8NG04 563 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 CANT1Q8WVQ1 401 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 DDOQ99489 341 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 IL1RAPQ9NPH3 570 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 IL19Q9UHD0 177 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 ATPIF1Q9UII2 106 aa13.66□□□□□ -0.22
LMNA-222ENST00000508500 A0A0G2JMP0 313 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 A0A0X1KG70 313 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 OR10H3O60404 316 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 FABP3P05413 133 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 SBK2P0C263 348 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 RAP2AP10114 183 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 EPHA1P21709 976 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 ANOS1P23352 680 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 CRABP1P29762 137 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 SLC6A6P31641 620 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 CENPAP49450 140 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 PRSS12P56730 875 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 SMIM11AP58511 58 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 ZMYND11Q15326 602 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 DCAF12L2Q5VW00 463 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 OR2T2Q6IF00 324 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 SLC18B1Q6NT16 456 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 PGBD2Q6P3X8 592 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 SHQ1Q6PI26 577 aaKnown RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 CFAP77Q6ZQR2 320 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 COLCA1Q6ZS62 124 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 NAA40Q86UY6 237 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 OR4M2Q8NGB6 313 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 ZNRF4Q8WWF5 429 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 OR2V2Q96R30 315 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 COQ7Q99807 217 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 KRCC1Q9NPI7 259 aaPredicted RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 PNRC2Q9NPJ4 139 aaKnown RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 MMP26Q9NRE1 261 aa13.65□□□□□ -0.22
LMNA-222ENST00000508500 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
LMNA-222ENST00000508500 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 TRAPPC2LH3BP13 241 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 MLNRO43193 412 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 GGT2P36268 569 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 DNM1P34Q6PK57 102 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 ZNF620Q6ZNG0 422 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 ZDHHC21Q8IVQ6 265 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 SDR9C7Q8NEX9 313 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 ZNF420Q8TAQ5 688 aaPredicted RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 APOBEC3DQ96AK3 386 aaPredicted RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 COG8Q96MW5 612 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 IFT27Q9BW83 186 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 HDHD2Q9H0R4 259 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 EGLN3Q9H6Z9 239 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 WDR76Q9H967 626 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 GCM1Q9NP62 436 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 NKX1-2Q9UD57 310 aaPredicted RBP13.64□□□□□ -0.23
LMNA-222ENST00000508500 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
LMNA-222ENST00000508500 F5H0A9 414 aaPredicted RBP13.63□□□□□ -0.23
LMNA-222ENST00000508500 TMEM178BH3BS89 294 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 J3QLI3 93 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 J3QW42 95 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 BAG2O95816 211 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 RENP00797 406 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 ACSM4P0C7M7 580 aa13.63□□□□□ -0.23
LMNA-222ENST00000508500 PSKH1P11801 424 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms