RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ZNF613Q6PF04 617 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 DEF8Q6ZN54 512 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF836Q6ZNA1 936 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 Q6ZRM9 215 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 DTX2Q86UW9 622 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 P2RY8Q86VZ1 359 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RBM45Q8IUH3 476 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RNF113BQ8IZP6 322 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 OR4D11Q8NGI4 311 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 OR52B4Q8NGK2 314 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RNF138Q8WVD3 245 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 FCGR1BQ92637 280 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 GGHQ92820 318 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 BOD1Q96IK1 185 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IMMP1LQ96LU5 166 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 WDR77Q9BQA1 342 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 WFDC6Q9BQY6 131 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 C6orf62Q9GZU0 229 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 SLC22A4Q9H015 551 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 AMBNQ9NP70 447 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RAB18Q9NP72 206 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IMPAD1Q9NX62 359 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 MGAT4BQ9UQ53 548 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 FRYQ5TBA9 3013 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 MPZL2O60487 215 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RAD1O60671 282 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 NCR1O76036 304 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 LCKP06239 509 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CDK1P06493 297 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 H1F0P07305 194 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 UMODP07911 640 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IL12BP29460 328 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PTGER1P34995 402 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 RGS8P57771 180 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 TRAM2Q15035 370 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 SLC22A10Q63ZE4 541 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 LACC1Q8IV20 430 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 C9orf40Q8IXQ3 194 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 APCDD1LQ8NCL9 501 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 FAM71CQ8NEG0 241 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 VANGL1Q8TAA9 524 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 GRHL3Q8TE85 626 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PIK3R3Q92569 461 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 BORCS5Q969J3 196 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PLEKHA8Q96JA3 519 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 DDOQ99489 341 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 FNDC11Q9BVV2 318 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 MYEF2Q9P2K5 600 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 EIF3KQ9UBQ5 218 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CACNA1BQ00975 2339 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 SH3PXD2BA1X283 911 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 SERINC4A6NH21 518 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 CLDN24A6NM45 220 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 A8MUA0 341 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 OR10H3O60404 316 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 FCMRO60667 390 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 TNFSF15O95150 251 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 DBTP11182 482 aaKnown RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 COX6A1P12074 109 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 TCN2P20062 427 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 GSTM3P21266 225 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 RBM34P42696 430 aaKnown RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF84P51523 738 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 EFNA3P52797 238 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 PDZK1IP1Q13113 114 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 KIF26BQ2KJY2 2108 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 FNDC7Q5VTL7 733 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 TMEM236Q5W0B7 351 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 LCN10Q6JVE6 187 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 H3F3CQ6NXT2 135 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 LANCL3Q6ZV70 420 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 CDK20Q8IZL9 346 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 STXBP6Q8NFX7 210 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 OR10S1Q8NGN2 331 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 SLC7A13Q8TCU3 470 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 MITD1Q8WV92 249 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 NSMAFQ92636 917 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 RFT1Q96AA3 541 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 OTUB1Q96FW1 271 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 LAT2Q9GZY6 243 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 NXF5Q9H1B4 397 aaKnown RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 TMEM27Q9HBJ8 222 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 GPR83Q9NYM4 423 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 PEF1Q9UBV8 284 aaKnown RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 MAP1BP46821 2468 aaKnown RBP6.29□□□□□ -1.4
CLCN3-206ENST00000507875 CPAMD8Q8IZJ3 1885 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
CLCN3-206ENST00000507875 TRAPPC13A5PLN9 417 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OOEPA6NGQ2 149 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TOR1AO14656 332 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 EPPINO95925 133 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 CD36P16671 472 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 RAB4AP20338 218 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TCEA1P23193 301 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms