RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 LCATP04180 440 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 BMP4P12644 408 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 LOXP28300 417 aaPredicted RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 GCH1P30793 250 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 APOBEC3AP31941 199 aaPredicted RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 OTX1P32242 354 aaPredicted RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 FABP6P51161 128 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 PRKXP51817 358 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 GALEQ14376 348 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 ZNF718Q3SXZ3 478 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 RGS7BPQ6MZT1 257 aaPredicted RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 LRRN1Q6UXK5 716 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 TMPRSS11AQ6ZMR5 421 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 MYPOPQ86VE0 399 aaPredicted RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 ZNF295-AS1Q8N0V1 137 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 FBXL14Q8N1E6 418 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 KBTBD8Q8NFY9 601 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 OR10S1Q8NGN2 331 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 OR1J1Q8NGS3 322 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 GGHQ92820 318 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 DHRS9Q9BPW9 319 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 JAM3Q9BX67 310 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 CA10Q9NS85 328 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 GPR160Q9UJ42 338 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 DIMT1Q9UNQ2 313 aaKnown RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 COPS3Q9UNS2 423 aa17.35■□□□□ 0.37
USP53-203ENST00000507597 SPTAN1Q13813 2472 aaKnown RBP17.35■□□□□ 0.37
USP53-203ENST00000507597 J3QRE1 110 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 SLC1A7O00341 560 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 IGHA1P01876 353 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 ACSM4P0C7M7 580 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 CX3CR1P49238 355 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 ST3GAL4Q11206 333 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 KRTAP27-1Q3LI81 207 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 C20orf204Q6ZNR8 217 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 ZNF786Q8N393 782 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 YIPF7Q8N8F6 280 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 OR52H1Q8NGJ2 320 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 ABHD4Q8TB40 342 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 HS3ST6Q96QI5 342 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 C1QTNF5Q9BXJ0 243 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 OPA3Q9H6K4 179 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 MOB1AQ9H8S9 216 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 LRP12Q9Y561 859 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 ADGRG4Q8IZF6 3080 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 COL12A1Q99715 3063 aa17.34■□□□□ 0.37
USP53-203ENST00000507597 SMPD2O60906 423 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ANXA2P07355 339 aaKnown RBP17.33■□□□□ 0.36
USP53-203ENST00000507597 RPSAP08865 295 aaKnown RBP17.33■□□□□ 0.36
USP53-203ENST00000507597 DBHP09172 617 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 FAM157BP0CG42 384 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 PSKH1P11801 424 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 CFL1P23528 166 aaKnown RBP17.33■□□□□ 0.36
USP53-203ENST00000507597 PPP1CBP62140 327 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 HGFACQ04756 655 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 SPOCK1Q08629 439 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 AGAP6Q5VW22 663 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ZNF787Q6DD87 383 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ZNF611Q8N823 705 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 SMAP2Q8WU79 429 aaPredicted RBP17.33■□□□□ 0.36
USP53-203ENST00000507597 SLC7A6Q92536 515 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ITFG2Q969R8 447 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 DOK1Q99704 481 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ALG8Q9BVK2 526 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 OR10A2Q9H208 303 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 SLCO1C1Q9NYB5 712 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 ZNF391Q9UJN7 358 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 LRRC42Q9Y546 428 aa17.33■□□□□ 0.36
USP53-203ENST00000507597 TMEM269A0A1B0GVZ9 245 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 PTGES3LE9PB15 166 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 XRCC2O43543 280 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 XPNPEP2O43895 674 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 ATE1O95260 518 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 PLAUP00749 431 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 PSMA6P60900 246 aaKnown RBP17.32■□□□□ 0.36
USP53-203ENST00000507597 NKX6-1P78426 367 aaPredicted RBP17.32■□□□□ 0.36
USP53-203ENST00000507597 VHLLQ6RSH7 139 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 COLCA1Q6ZS62 124 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 AHSA2Q719I0 299 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 LHFPL3Q86UP9 236 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 SYS1Q8N2H4 156 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 KLHL36Q8N4N3 616 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 PAQR4Q8N4S7 273 aaPredicted RBP17.32■□□□□ 0.36
USP53-203ENST00000507597 PGAM5Q96HS1 289 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 AMELYQ99218 206 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 UBTD1Q9HAC8 227 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 ERVK13-1Q9NX77 482 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 GNG8Q9UK08 70 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 ERGIC3Q9Y282 383 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
USP53-203ENST00000507597 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
USP53-203ENST00000507597 E7EQL1 145 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 MT-ND5P03915 603 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 SELEP16581 610 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 EEF1B2P24534 225 aaKnown RBP17.31■□□□□ 0.36
USP53-203ENST00000507597 SERPINF1P36955 418 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 WNT5AP41221 380 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 EVX1P49640 407 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms