RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 GMDSO60547 372 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 NPIPB7O75200 414 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PTP4A3O75365 173 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF254O75437 659 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SC5DO75845 299 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 LYZL6O75951 148 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PLAUP00749 431 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PTHP01270 115 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 IFNA4P05014 189 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 BCHEP06276 602 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 HOXB9P17482 250 aaPredicted RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 GPX2P18283 190 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 IGHV1-2P23083 117 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 MAPK3P27361 379 aaPredicted RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SLC6A1P30531 599 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PRKAR1BP31321 381 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 NTF4P34130 210 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PTH2RP49190 550 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 DHODHQ02127 395 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SLC17A1Q14916 467 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PPA1Q15181 289 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SPHARQ15513 63 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TSTQ16762 297 aaKnown RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 KLHL22Q53GT1 634 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF311Q5JNZ3 666 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 Q5PR19 223 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF730Q6ZMV8 503 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF836Q6ZNA1 936 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 HMGN2P46Q86SG4 172 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 VRK2Q86Y07 508 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 STPG2Q8N412 459 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 OR4M2Q8NGB6 313 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 BBS10Q8TAM1 723 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 FANK1Q8TC84 345 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 STK35Q8TDR2 534 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ST8SIA4Q92187 359 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM45BQ96B21 275 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM19Q96HH6 336 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 BOD1Q96IK1 185 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 MMP28Q9H239 520 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PPIL3Q9H2H8 161 aaKnown RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 PPP1R3EQ9H7J1 279 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 EVA1AQ9H8M9 152 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 CACYBPQ9HB71 228 aaKnown RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ASB6Q9NWX5 421 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 RDH8Q9NYR8 311 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TAS2R16Q9NYV7 291 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SLC23A1Q9UHI7 598 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 TMCC3Q9ULS5 477 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF443Q9Y2A4 671 aaPredicted RBP7.04□□□□□ -1.28
SCN1A-207ENST00000507401 SLC9A8Q9Y2E8 581 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 CHST2Q9Y4C5 530 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 FLVCR1Q9Y5Y0 555 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 CDH10Q9Y6N8 788 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 U3KQV3 271 aa7.04□□□□□ -1.28
SCN1A-207ENST00000507401 A0A1W2PQL4 384 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM129A0AVI4 362 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 ZC3H12DA2A288 527 aaKnown RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 OR6C65A6NJZ3 312 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF98A6NK75 572 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 A8MV72 311 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 A8MXK9 166 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 C5orf58C9J3I9 102 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 OVOL3O00110 214 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 TNFRSF11BO00300 401 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 PLA2G10O15496 165 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 GATCO43716 136 aaKnown RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 CHP2O43745 196 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 MITFO75030 526 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 GPX5O75715 221 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF682O95780 498 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 DANCRP0C864 163 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 GKN3PP0CG01 181 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 CPEP16870 476 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 PRKACGP22612 351 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 EDNRAP25101 427 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 PTAFRP25105 342 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 C21orf33P30042 268 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 RPS19P39019 145 aaKnown RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 CRYBB2P43320 205 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 HMGA2P52926 109 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 SMIM11AP58511 58 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 SSTP61278 116 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 RPS4XP62701 263 aaKnown RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 IL1RL1Q01638 556 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 BSPH1Q075Z2 132 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 MED22Q15528 200 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 STK11Q15831 433 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 ETFDHQ16134 617 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 GABRA6Q16445 453 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF672Q499Z4 452 aaPredicted RBP7.03□□□□□ -1.28
SCN1A-207ENST00000507401 GTDC1Q4AE62 458 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM225Q6GV28 225 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 LIN54Q6MZP7 749 aa7.03□□□□□ -1.28
SCN1A-207ENST00000507401 REEP3Q6NUK4 255 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms