RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 KRCC1Q9NPI7 259 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF446Q9NWS9 450 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 PCDHGB1Q9Y5G3 927 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 V9GYQ6 96 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 IGHV3OR16-10A0A075B7F0 116 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 IQCF6A8MYZ5 107 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 F5H5P2 479 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 WIPF1O43516 503 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 PRTN3P24158 256 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 CD80P33681 288 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 DBPQ10586 325 aaPredicted RBP9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 COX10Q12887 443 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 FOXL1Q12952 345 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 BAMBIQ13145 260 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 KRT72Q14CN4 511 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 GLYATQ6IB77 296 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 LEG1Q6P5S2 330 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 CFAP77Q6ZQR2 320 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 MOGAT3Q86VF5 341 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 JAZF1Q86VZ6 243 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 KLBQ86Z14 1044 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 LINC00346Q8IVM7 164 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC30A2Q9BRI3 323 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 FUZQ9BT04 418 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF747Q9BV97 191 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 MS4A7Q9GZW8 240 aaPredicted RBP9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 ZMAT3Q9HA38 289 aaKnown RBP9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 TMEM165Q9HC07 324 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 DCAF13Q9NV06 445 aaKnown RBP9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 B9D1Q9UPM9 204 aa9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 SAMD4AQ9UPU9 718 aaKnown RBP9.67□□□□□ -0.86
HMGCS1-204ENST00000507293 RENP00797 406 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 IGHV4-38-2P0DP08 117 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SELEP16581 610 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC6A6P31641 620 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 MDH1P40925 334 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 GNB2P62879 340 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SPIBQ01892 262 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 PAX2Q02962 417 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 PAX8Q06710 450 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 RSPO1Q2MKA7 263 aaPredicted RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 BTNL3Q6UXE8 466 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 OR6V1Q8N148 313 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 PARP8Q8N3A8 854 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 RNF148Q8N7C7 305 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC26A10Q8NG04 563 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 OR52E2Q8NGJ4 325 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 OR4K13Q8NH42 304 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 NEIL1Q96FI4 390 aaPredicted RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 NMNAT3Q96T66 252 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 HCAR1Q9BXC0 346 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 OR52D1Q9H346 318 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 FN3KQ9H479 309 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SPAG4Q9NPE6 437 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 RPRD1BQ9NQG5 326 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 TMEM100Q9NV29 134 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 ADA2Q9NZK5 511 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 MIOXQ9UGB7 285 aa9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 SOX21Q9Y651 276 aaPredicted RBP9.66□□□□□ -0.86
HMGCS1-204ENST00000507293 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 IGHV2-70DA0A0C4DH43 119 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 LRRC30A6NM36 301 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 TMPRSS2O15393 492 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 GADD45GO95257 159 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 HLA-DPB1P04440 258 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 ACSM4P0C7M7 580 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 HIST1H1CP16403 213 aaKnown RBP9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 CPT2P23786 658 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 FPR3P25089 353 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 PMELP40967 661 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 RFX4Q33E94 735 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 KRTAP27-1Q3LI81 207 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF404Q494X3 552 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC18B1Q6NT16 456 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 LRRN1Q6UXK5 716 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 COLCA1Q6ZS62 124 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 C1orf87Q8N0U7 546 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 SDR9C7Q8NEX9 313 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 RAB40AQ8WXH6 277 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 DACT3Q96B18 629 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 UPRTQ96BW1 309 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 CMTM5Q96DZ9 223 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 PLEKHA8Q96JA3 519 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 PITX2Q99697 317 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 ATF6BQ99941 703 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 IFT27Q9BW83 186 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
HMGCS1-204ENST00000507293 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 A0A1B0GWJ7 208 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 F5H5K5 113 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 ARPC3O15145 178 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 GMNNO75496 209 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms