RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 EIF3MQ7L2H7 374 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C6orf120Q7Z4R8 191 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CEACAM19Q7Z692 300 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CLECL1Q8IZS7 167 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CLEC4FQ8N1N0 589 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 LRRC25Q8N386 305 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC25A45Q8N413 288 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DEFB119Q8N690 84 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ANKFN1Q8N957 763 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CDRT4Q8N9R6 151 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 RELL2Q8NC24 303 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF555Q8NEP9 628 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4D9Q8NGE8 314 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 OR6T1Q8NGN1 323 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CCL4L1Q8NHW4 92 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TYMSOSQ8TAI1 123 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SFXN5Q8TD22 340 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CANT1Q8WVQ1 401 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 PCNPQ8WW12 178 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 GEMIN6Q8WXD5 167 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 EXOSC8Q96B26 276 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLCO4A1Q96BD0 722 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NEURL3Q96EH8 262 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 AURKBQ96GD4 344 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SMIM10Q96HG1 83 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 LINC00167Q96N53 147 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 AMDHD1Q96NU7 426 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TGM7Q96PF1 710 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 MS4A4EQ96PG1 132 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TRNT1Q96Q11 434 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC39A3Q9BRY0 314 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DOHHQ9BU89 302 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 OSBPL11Q9BXB4 747 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 YTHDF1Q9BYJ9 559 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC7A5P2Q9GIP4 190 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 POLR2J2Q9GZM3 115 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 POLR2J3Q9H1A7 115 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 REEP1Q9H902 201 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC25A19Q9HC21 320 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 BCL2L10Q9HD36 194 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 POLE3Q9NRF9 147 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 AGPAT4Q9NRZ5 378 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ZCCHC3Q9NUD5 404 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DDX18Q9NVP1 670 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SOHLH2Q9NX45 425 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 KLHL28Q9NXS3 571 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SMPD3Q9NY59 655 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 NDUFA13Q9P0J0 144 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 P2RX2Q9UBL9 471 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SEC14L3Q9UDX4 400 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TEKT2Q9UIF3 430 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 C3orf18Q9UK00 162 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 MRTO4Q9UKD2 239 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 TMCC3Q9ULS5 477 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CFL2Q9Y281 166 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CA5BQ9Y2D0 317 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC9A8Q9Y2E8 581 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 FBXO7Q9Y3I1 522 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ATG4BQ9Y4P1 393 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ASB4Q9Y574 426 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 AUP1Q9Y679 476 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 SHROOM3Q8TF72 1996 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 ANKRD11Q6UB99 2663 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 MUC22E2RYF6 1773 aaPredicted RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 DENND4CQ5VZ89 1909 aa1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 MKI67P46013 3256 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 KIAA0100Q14667 2235 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-205ENST00000506779 CACNA1GO43497 2377 aa1.96□□□□□ -2.09
TOPBP1-205ENST00000506779 VCANP13611 3396 aa1.96□□□□□ -2.09
TOPBP1-205ENST00000506779 IGHV1OR21-1A0A087WYE8 117 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SNTNA6NMZ2 147 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 WASHC1A8K0Z3 465 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 M0R3G1 203 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MPZL2O60487 215 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TPST1O60507 370 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TSPAN2O60636 221 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SDC3O75056 442 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 UGT2B11O75310 529 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SH3BGRLO75368 114 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 STX11O75558 287 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 H6PDO95479 791 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OXSR1O95747 527 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 AIFM1O95831 613 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PDGFBP01127 241 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 IFNW1P05000 195 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 HMGN2P05204 90 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 FCER2P06734 321 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 DBIP07108 87 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 KLK3P07288 261 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RPSAP08865 295 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ALOX5P09917 674 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 THRBP10828 461 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ANXA8P13928 327 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CPMP14384 443 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 UQCRBP14927 111 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 HPGDP15428 266 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CD1EP15812 388 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 NCK1P16333 377 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 NELFEP18615 380 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TNNI3P19429 210 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms