RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CXCR6O00574 342 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 HOXA3O43365 443 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 NDUFA2O43678 99 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 KRT34O76011 436 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 RENP00797 406 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 IGHV4-38-2P0DP08 117 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 KCNMB1Q16558 191 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 DPY19L2P2Q6ZN68 376 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 JAZF1Q86VZ6 243 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 PNLDC1Q8NA58 520 aaKnown RBP17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 BHLHE23Q8NDY6 225 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 OR10S1Q8NGN2 331 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 TBC1D15Q8TC07 691 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 C1orf147Q96MC9 270 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 TECTBQ96PL2 329 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 CCT8L2Q96SF2 557 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 C1QTNF5Q9BXJ0 243 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 POFUT1Q9H488 388 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 VIPAS39Q9H9C1 493 aa17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 VSX1Q9NZR4 365 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-210ENST00000506042 IGHV3OR16-10A0A075B7F0 116 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 P2RY10O00398 339 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 SOCS2O14508 198 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 H1F0P07305 194 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 MDKP21741 143 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 GATA4P43694 442 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 RAG2P55895 527 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 HLXQ14774 488 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 FGD3Q5JSP0 725 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 BRICD5Q6PL45 260 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 FAM122BQ7Z309 247 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 SPRYD4Q8WW59 207 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 FAM162AQ96A26 154 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 GPX7Q96SL4 187 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 HOPXQ9BPY8 73 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 TRIM15Q9C019 465 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 MMADHCQ9H3L0 296 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 FN3KRPQ9HA64 309 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 NRIP3Q9NQ35 241 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 MGAM2Q2M2H8 2515 aa17.59■□□□□ 0.41
SQSTM1-210ENST00000506042 RER1O15258 196 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 SMIM11AP58511 58 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 METTL11BQ5VVY1 283 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 CBLL1Q75N03 491 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 PGAP1Q75T13 922 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 MRPL21Q7Z2W9 205 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 VTCN1Q7Z7D3 282 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 POU5F2Q8N7G0 328 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 SSMEM1Q8WWF3 244 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 GATAD2BQ8WXI9 593 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 SLC7A6Q92536 515 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 UBE2FQ969M7 185 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 FAM46AQ96IP4 442 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 PITX2Q99697 317 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 SAR1AQ9NR31 198 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 ENPP4Q9Y6X5 453 aa17.58■□□□□ 0.4
SQSTM1-210ENST00000506042 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 A0A1W2PRQ8 180 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 F5H5P2 479 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 J3KTA2 159 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 CDC42EP2O14613 210 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 SCG5P05408 212 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 NOS3P29474 1203 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 TPTEP56180 551 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 FGF12P61328 243 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 PAX2Q02962 417 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 DGCR6Q14129 220 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 C11orf91Q3C1V1 193 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 CCDC92Q53HC0 331 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 WDR25Q64LD2 544 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 OLFML2AQ68BL7 652 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 RP9Q8TA86 221 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 Q8TCH9 128 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 SPTSSAQ969W0 71 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 RSRC1Q96IZ7 334 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 HSH2DQ96JZ2 352 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 PCGF1Q9BSM1 259 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 NUAK2Q9H093 628 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 SIGLEC7Q9Y286 467 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 CAB39Q9Y376 341 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 IER3IP1Q9Y5U9 82 aa17.57■□□□□ 0.4
SQSTM1-210ENST00000506042 FAM181BA6NEQ2 426 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 NDUFA7O95182 113 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 ZNF205O95201 554 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 HLA-DQA2P01906 255 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 LIPEQ05469 1076 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 OR8G1Q15617 311 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 DEFB112Q30KQ8 113 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 SMARCD3Q6STE5 483 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 FIP1L1Q6UN15 594 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 ZNF620Q6ZNG0 422 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 FITM2Q8N6M3 262 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 SPERTQ8NA61 448 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 PLPP7Q8NBV4 271 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 OR4C15Q8NGM1 316 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 LRTOMTQ8WZ04 291 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 ATF6BQ99941 703 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 PRDM13Q9H4Q3 707 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 RNF7Q9UBF6 113 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms