RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 TSEN15Q8WW01 171 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 ASB5Q8WWX0 329 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 PPP1R14AQ96A00 147 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 TMEM106AQ96A25 262 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 NABP1Q96AH0 204 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 GFI1Q99684 422 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 SMAD5Q99717 465 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 ZNF416Q9BWM5 594 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 PBOV1Q9GZY1 135 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 DEFB127Q9H1M4 99 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 EXO5Q9H790 373 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 SP140LQ9H930 580 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 PNRC2Q9NPJ4 139 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 FAIMQ9NVQ4 179 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 TBCCD1Q9NVR7 557 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 ASH2LQ9UBL3 628 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 NUFIP1Q9UHK0 495 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 FBXL3Q9UKT7 428 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 NOSIPQ9Y314 301 aaKnown RBP7.1□□□□□ -1.27
COL4A5-208ENST00000505728 KCNMB2Q9Y691 235 aa7.1□□□□□ -1.27
COL4A5-208ENST00000505728 SVILO95425 2214 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 MED12LQ86YW9 2145 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 A0A1B0GVC2 190 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 LOC107986453A0A1B0GWG9 222 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 CYSRT1A8MQ03 144 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 RPL36A-HNRNPH2H7BZ11 118 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PYCARD-AS1I3L0S3 204 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 RER1O15258 196 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 EFSO43281 561 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 TPPPO94811 219 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PAHP00439 452 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ITGB2P05107 769 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 YES1P07947 543 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 SLC2A2P11168 524 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 IGFBP3P17936 291 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 FSTP19883 344 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 CFPP27918 469 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 NTF4P34130 210 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 NR4A2P43354 598 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 UCNP55089 124 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PCBD1P61457 104 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 SCN1BQ07699 218 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ECH1Q13011 328 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 IL18Q14116 193 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ODF4Q2M2E3 257 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 NRN1LQ496H8 165 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 CCDC92Q53HC0 331 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PYDC2Q56P42 97 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ELFN2Q5R3F8 820 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 GLT8D1Q68CQ7 371 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PYHIN1Q6K0P9 492 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 IGFL3Q6UXB1 125 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 SNX29P2Q8IUI4 249 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 MCEMP1Q8IX19 187 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ZNF433Q8N7K0 673 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 SAMD12Q8N8I0 201 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 POC5Q8NA72 575 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 CCDC54Q8NEL0 328 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 OR51A4Q8NGJ6 313 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ZNF671Q8TAW3 534 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ZNF775Q96BV0 537 aaPredicted RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 WDYHV1Q96HA8 205 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 FOXB1Q99853 325 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 SLCO5A1Q9H2Y9 848 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 BCO1Q9HAY6 547 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 GPR35Q9HC97 309 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 DDX28Q9NUL7 540 aaKnown RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 TMEM38BQ9NVV0 291 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 EXTL2Q9UBQ6 330 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 CKLFQ9UBR5 152 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 ZNF175Q9Y473 711 aa7.09□□□□□ -1.27
COL4A5-208ENST00000505728 PCDHGA9Q9Y5G4 932 aaKnown RBP7.09□□□□□ -1.27
COL4A5-208ENST00000505728 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 TNRC6AQ8NDV7 1962 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 A0A1B0GVI7 797 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 ANXA2P2A6NMY6 339 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 J3QKU1 62 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 K7ENP7 123 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 P2RY10O00398 339 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 TFECO14948 347 aaPredicted RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 KRT33AO76009 404 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 FARS2O95363 451 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 PTTG1O95997 202 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 TTRP02766 147 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 MAS1P04201 325 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 EIF4EP06730 217 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 ANXA2P07355 339 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 ACSM4P0C7M7 580 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 IL7P13232 177 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 SNRPBP14678 240 aaKnown RBP7.08□□□□□ -1.28
COL4A5-208ENST00000505728 ADRA2CP18825 462 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 CX3CR1P49238 355 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 PRKXP51817 358 aa7.08□□□□□ -1.28
COL4A5-208ENST00000505728 CAPZA1P52907 286 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms