RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 CHN2P52757 468 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 LMO4P61968 165 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 DGCR6Q14129 220 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 TSTQ16762 297 aaKnown RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 THEM4Q5T1C6 240 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 IGFL4Q6B9Z1 124 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 Q6ZR03 302 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 USP51Q70EK9 711 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 IL17DQ8TAD2 202 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 SYNPRQ8TBG9 265 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 KLF14Q8TD94 323 aaPredicted RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 RSRC1Q96IZ7 334 aaKnown RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 C16orf92Q96LL3 132 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 ZNF570Q96NI8 536 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 GPX7Q96SL4 187 aaPredicted RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 HOPXQ9BPY8 73 aaPredicted RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 FN3KQ9H479 309 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 EFCAB1Q9HAE3 211 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 CCNB1IP1Q9NPC3 277 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 NRIP3Q9NQ35 241 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 HINT3Q9NQE9 182 aaKnown RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 BATF3Q9NR55 127 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 DCAF13Q9NV06 445 aaKnown RBP4.11□□□□□ -1.75
CDH9-203ENST00000505045 ADA2Q9NZK5 511 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 FBXL3Q9UKT7 428 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 SPEF1Q9Y4P9 236 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 VWFP04275 2813 aa4.11□□□□□ -1.75
CDH9-203ENST00000505045 MGAM2Q2M2H8 2515 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 RER1O15258 196 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 PPIHO43447 177 aaKnown RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 PTP4A3O75365 173 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 PPP1R3DO95685 299 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 IGHV3-13P01766 116 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 ERCC1P07992 297 aaPredicted RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 CST2P09228 141 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 SELEP16581 610 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 APLNRP35414 380 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 RPL4P36578 427 aaKnown RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 RPS27P42677 84 aaKnown RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 CDKN2AP42771 156 aaKnown RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 HTR5AP47898 357 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 PPP1CBP62140 327 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 PSG7Q13046 419 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 ZBED5Q49AG3 693 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 GLYATQ6IB77 296 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 CORO6Q6QEF8 472 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 HDDC2Q7Z4H3 204 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 ZER1Q7Z7L7 766 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
CDH9-203ENST00000505045 ZNF540Q8NDQ6 660 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 OR9Q2Q8NGE9 314 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 OR14K1Q8NGZ2 314 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 SPATA3Q8NHX4 192 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 FANK1Q8TC84 345 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 RDH5Q92781 318 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 BTBD10Q9BSF8 475 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 C19orf24Q9BVV8 132 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 BCL2L14Q9BZR8 327 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 NUAK2Q9H093 628 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 MS4A5Q9H3V2 200 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 C1orf198Q9H425 327 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 RERGLQ9H628 205 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 SAP30LQ9HAJ7 183 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 HIF1ANQ9NWT6 349 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 VNN3Q9NY84 501 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 GRHPRQ9UBQ7 328 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 CD300AQ9UGN4 299 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 WIPI2Q9Y4P8 454 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 LHFPL6Q9Y693 200 aa4.1□□□□□ -1.75
CDH9-203ENST00000505045 IGLV1-36A0A0B4J1U3 117 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 IGHV1-69-2A0A0G2JMI3 117 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 IGHV3-64DA0A0J9YX35 117 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 C5orf63A6NC05 138 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 OR6C6A6NF89 314 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 A6NIZ1 184 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 SGCEO43556 437 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 SLC16A7O60669 478 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 NDUFB2O95178 105 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 ABHD16AO95870 558 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 MSMBP08118 114 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 HSD17B1P14061 328 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 RHCEP18577 417 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 ADRA2CP18825 462 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 PRDX6P30041 224 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 RRM2P31350 389 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 RAD52P43351 418 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 GDI2P50395 445 aaKnown RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 ZNF81P51508 661 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 RAP1BP61224 184 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 SEC61A1P61619 476 aaKnown RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 RAP1AP62834 184 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 SPIBQ01892 262 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 PPP1R8Q12972 351 aaKnown RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 HLXQ14774 488 aaPredicted RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 TAF11Q15544 211 aa4.09□□□□□ -1.75
CDH9-203ENST00000505045 CCDC92Q53HC0 331 aaPredicted RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.75
CDH9-203ENST00000505045 FAM205BPQ63HN1 556 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms