RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 KRT74Q7RTS7 529 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 GJC3Q8NFK1 279 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 UPRTQ96BW1 309 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF837Q96EG3 531 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF845Q96IR2 970 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 LOC390937A0A1W2PQ73 354 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 NME2P1O60361 137 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 GLSO94925 669 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 SP1P08047 785 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 TMIGD3P0DMS9 266 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 NME2P22392 152 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 SOX8P57073 446 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 KLF9Q13886 244 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 C2orf76Q3KRA6 126 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 SLC25A25Q6KCM7 469 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 SIAH3Q8IW03 269 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 OR8B12Q8NGG6 310 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 LOC100289279A0A1B0GTE1 492 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 OR5H15A6NDH6 313 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 CX3CR1P49238 355 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 RSBN1Q5VWQ0 802 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 ANKRD16Q6P6B7 361 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM251Q8N6I4 163 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 OR1J2Q8NGS2 313 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 FGGYQ96C11 551 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 SLC17A5Q9NRA2 495 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF319Q9P2F9 582 aa18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 KLF13Q9Y2Y9 288 aaPredicted RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 RBMX2Q9Y388 322 aaKnown RBP18.81■□□□□ 0.6
UBE2D3-216ENST00000503742 ARGFXA6NJG6 315 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 XRCC3O43542 346 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 ORC5O43913 435 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 ANOS1P23352 680 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 HTR2CP28335 458 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 GDNFP39905 211 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 MAGEA5P43359 124 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 EFNB2P52799 333 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 CLDN18P56856 261 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 TAS2R20P59543 309 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 MRPS10P82664 201 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 SPOCK1Q08629 439 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 NDUFA5Q16718 116 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 HYAL4Q2M3T9 481 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 C1orf100Q5SVJ3 147 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 FAM27BQ5VT28 67 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 MTFR2Q6P444 385 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 AAED1Q7RTV5 226 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 GALNTL5Q7Z4T8 443 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 LUZP2Q86TE4 346 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 NKAIN3Q8N8D7 197 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 OR6M1Q8NGM8 313 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 OR52I2Q8NH67 350 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 OR51E1Q8TCB6 317 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 C15orf40Q8WUR7 153 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 ADAT3Q96EY9 351 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM165Q9HC07 324 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 RHBDD3Q9Y3P4 386 aa18.8■□□□□ 0.6
UBE2D3-216ENST00000503742 FAM166BA8MTA8 275 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 CTAG2O75638 210 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 TRAPPC2P0DI81 140 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 TRAPPC2BP0DI82 140 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 SLC2A1P11166 492 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 CCL1P22362 96 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 DYRK1AQ13627 763 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 GLYATL3Q5SZD4 288 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF529Q6P280 563 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF813Q6ZN06 617 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 DNM1P46Q6ZS02 220 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 BIVMQ86UB2 503 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 GCDHQ92947 438 aaPredicted RBP18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 CREB3L1Q96BA8 519 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 C7orf50Q9BRJ6 194 aaKnown RBP18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 CGGBP1Q9UFW8 167 aaPredicted RBP18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM272A0A1B0GTI8 110 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 A0A1B0GVI7 797 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 HMX3A6NHT5 357 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF708P17019 499 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 IGF2-ASQ6U949 168 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 LRRC18Q8N456 261 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF283Q8N7M2 679 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 OR6F1Q8NGZ6 308 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 CPT1CQ8TCG5 803 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 NKX3-1Q99801 234 aaPredicted RBP18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 SLC6A15Q9H2J7 730 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
UBE2D3-216ENST00000503742 PTPRBP23467 1997 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 DCDC2BA2VCK2 349 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 CENPXA8MT69 81 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 CCNKO75909 580 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 KRT33AO76009 404 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 OTX1P32242 354 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 MEOX1P50221 254 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 TATDN3Q17R31 274 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 ABHD3Q8WU67 409 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM45BQ96B21 275 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 FOXRED1Q96CU9 486 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 FBXO17Q96EF6 278 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 KCNK15Q9H427 330 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 SLC5A6Q9Y289 635 aa18.78■□□□□ 0.6
UBE2D3-216ENST00000503742 IGKV3D-15A0A087WSY6 115 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms