RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RENP00797 406 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 PSKH1P11801 424 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 SELEP16581 610 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 TNFSF4P23510 183 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 PYCR1P32322 319 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 PPP1R8Q12972 351 aaKnown RBP13.68□□□□□ -0.22
SCLT1-204ENST00000503215 LYPD4Q6UWN0 246 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 C1QL2Q7Z5L3 287 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 ZBTB46Q86UZ6 589 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-204ENST00000503215 CYB561A3Q8NBI2 242 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 BHLHE23Q8NDY6 225 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF420Q8TAQ5 688 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-204ENST00000503215 GNPDA2Q8TDQ7 276 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 C22orf15Q8WYQ4 148 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 APOBEC3DQ96AK3 386 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-204ENST00000503215 DDOQ99489 341 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 COQ7Q99807 217 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 BTBD10Q9BSF8 475 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 GCM1Q9NP62 436 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 PNRC2Q9NPJ4 139 aaKnown RBP13.68□□□□□ -0.22
SCLT1-204ENST00000503215 IL19Q9UHD0 177 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 PPP1R3CQ9UQK1 317 aa13.68□□□□□ -0.22
SCLT1-204ENST00000503215 C5orf63A6NC05 138 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 F5H5K5 113 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 MLNRO43193 412 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 ACSM4P0C7M7 580 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 TNFRSF1AP19438 455 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 PMELP40967 661 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 RPS27P42677 84 aaKnown RBP13.67□□□□□ -0.22
SCLT1-204ENST00000503215 MMP16P51512 607 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 BTG1P62324 171 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCLT1-204ENST00000503215 TSPAN31Q12999 210 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-204ENST00000503215 DNM1P34Q6PK57 102 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 COLCA1Q6ZS62 124 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 CCDC197Q8NCU1 140 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 OR8D4Q8NGM9 314 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 PITX2Q99697 317 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 SLC6A7Q99884 636 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
SCLT1-204ENST00000503215 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 CYB5R1Q9UHQ9 305 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 ATPIF1Q9UII2 106 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 PCDHB10Q9UN67 800 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 LYVE1Q9Y5Y7 322 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
SCLT1-204ENST00000503215 F5H5P2 479 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 J3QLI3 93 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 CYB5R3P00387 301 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-204ENST00000503215 FSHBP01225 129 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 NOS3P29474 1203 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 SLC6A9P48067 706 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 RGS6P49758 472 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 HMGA2P52926 109 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 FAM201AQ5SY85 155 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF770Q6IQ21 691 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-204ENST00000503215 DEFB108BQ8NET1 73 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 OR51L1Q8NGJ5 315 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 OR4C15Q8NGM1 316 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 OR10S1Q8NGN2 331 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 ST7LQ8TDW4 575 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 MAP6Q96JE9 813 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 COG8Q96MW5 612 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
SCLT1-204ENST00000503215 A0A0A6YYJ9 748 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 TVP23AA6NH52 213 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 BHLHE40O14503 412 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 IDH3BO43837 385 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 FOXH1O75593 365 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 GASTP01350 101 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 HLA-DQA2P01906 255 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 IFNGR2P38484 337 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 MXRA7P84157 204 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 HOXA4Q00056 320 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-204ENST00000503215 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 PGM2L1Q6PCE3 622 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 C16orf89Q6UX73 402 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 MOGAT3Q86VF5 341 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 FITM2Q8N6M3 262 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 OR13G1Q8NGZ3 307 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-204ENST00000503215 C1QTNF5Q9BXJ0 243 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 CDH10Q9Y6N8 788 aa13.65□□□□□ -0.22
SCLT1-204ENST00000503215 CEACAM18A8MTB9 384 aa13.64□□□□□ -0.23
SCLT1-204ENST00000503215 IQCF6A8MYZ5 107 aa13.64□□□□□ -0.23
SCLT1-204ENST00000503215 B2RBV5 119 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms