RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MEF2DQ14814 521 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 OTPQ5XKR4 325 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 PGAP1Q75T13 922 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZNF627Q7L945 461 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GPAT4Q86UL3 456 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 WDSUB1Q8N9V3 476 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 OR8H1Q8NGG4 311 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 OR2Y1Q8NGV0 311 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 PNPLA2Q96AD5 504 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 MESP1Q9BRJ9 268 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 NAA11Q9BSU3 229 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 EMC6Q9BV81 110 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ANGPTL4Q9BY76 406 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ALX4Q9H161 411 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 ARRDC1-AS1Q9H2J1 176 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 FBLN5Q9UBX5 448 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GDF2Q9UK05 429 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 FBXL2Q9UKC9 423 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 PTRH2Q9Y3E5 179 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 MED19A0JLT2 244 aaPredicted RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 SHISA8B8ZZ34 492 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 EIF1AYO14602 144 aaKnown RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 DNPH1O43598 174 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 TTRP02766 147 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 GP1BAP07359 652 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 COX6A1P12074 109 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 FOLR3P41439 243 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 DSCR4P56555 118 aaPredicted RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 CSNK2A1P68400 391 aaPredicted RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 GABREP78334 506 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 ZFP36L1Q07352 338 aaKnown RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 SPOCK1Q08629 439 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 PMPCAQ10713 525 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 MPPED2Q15777 294 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 HIST3H3Q16695 136 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 C6orf183Q5T699 404 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 LCN10Q6JVE6 187 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 TMPPEQ6ZT21 453 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 GABRG1Q8N1C3 465 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 CCDC54Q8NEL0 328 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 OR1M1Q8NGA1 313 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 IMMP1LQ96LU5 166 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 TMPRSS13Q9BYE2 586 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 SEC61A2Q9H9S3 476 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 BEX1Q9HBH7 125 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 EIF3KQ9UBQ5 218 aaKnown RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 CGGBP1Q9UFW8 167 aaPredicted RBP10.65□□□□□ -0.7
NUP54-202ENST00000502850 SLC5A6Q9Y289 635 aa10.65□□□□□ -0.7
NUP54-202ENST00000502850 DNAH14Q0VDD8 3507 aa10.65□□□□□ -0.71
NUP54-202ENST00000502850 NSG1A0A0A6YYJ2 146 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 DCDC2BA2VCK2 349 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 A6NL46 340 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 B4E171 279 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 DOK2O60496 412 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 TSC22D2O75157 780 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 KDM4BO94953 1096 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 OR2A4O95047 310 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 RAB3DO95716 219 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 ZNF806P0C7X5 589 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 PTHLHP12272 177 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 ANXA7P20073 488 aaKnown RBP10.64□□□□□ -0.71
NUP54-202ENST00000502850 GNALP38405 381 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 TSPAN7P41732 249 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 LSM6P62312 80 aaKnown RBP10.64□□□□□ -0.71
NUP54-202ENST00000502850 PLA2G7Q13093 441 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 POU4F3Q15319 338 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 TMEM176BQ3YBM2 270 aaPredicted RBP10.64□□□□□ -0.71
NUP54-202ENST00000502850 CORO6Q6QEF8 472 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 ZNF813Q6ZN06 617 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 Q6ZTK2 550 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 OR2W3Q7Z3T1 314 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 LYPD6Q86Y78 171 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 SEH1LQ96EE3 360 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 OR2A7Q96R45 310 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 SEC22CQ9BRL7 303 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 EXO5Q9H790 373 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 MYOZ1Q9NP98 299 aaPredicted RBP10.64□□□□□ -0.71
NUP54-202ENST00000502850 SLC23A1Q9UHI7 598 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 DKKL1Q9UK85 242 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 PCDHGA5Q9Y5G8 931 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 MRPS18BQ9Y676 258 aaKnown RBP10.64□□□□□ -0.71
NUP54-202ENST00000502850 LHFPL6Q9Y693 200 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 U3KQ87 197 aa10.64□□□□□ -0.71
NUP54-202ENST00000502850 CACNA1AO00555 2505 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 A0A1W2PNR3 127 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 TUBAL3A6NHL2 446 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 DISC1C4P0D8 188 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 PYCARD-AS1I3L0S3 204 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 GDF9O60383 454 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 NOS1APO75052 506 aaPredicted RBP10.63□□□□□ -0.71
NUP54-202ENST00000502850 APOC1P02654 83 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 RLN1P04808 185 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 UMODP07911 640 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms