RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ZNF679Q8IYX0 411 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 KLHL36Q8N4N3 616 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 KCNJ15Q99712 375 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 JAM3Q9BX67 310 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 ELOVL3Q9HB03 270 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 MRM2Q9UI43 246 aaKnown RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 N6AMT1Q9Y5N5 214 aa11.75□□□□□ -0.53
CPNE1-227ENST00000498056 USP9YO00507 2555 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
CPNE1-227ENST00000498056 ABCA4P78363 2273 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 J3QLW9 94 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 TBX1O43435 398 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 SMPD2O60906 423 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 TNFAIP8O95379 198 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF19P17023 458 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-227ENST00000498056 CDH15P55291 814 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ROM1Q03395 351 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-227ENST00000498056 GALEQ14376 348 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 GFOD2Q3B7J2 385 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 OR2G6Q5TZ20 316 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ACBD4Q8NC06 268 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ABHD4Q8TB40 342 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-227ENST00000498056 CLEC2DQ9UHP7 191 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 SNX5Q9Y5X3 404 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 ATP23Q9Y6H3 246 aa11.74□□□□□ -0.53
CPNE1-227ENST00000498056 METTL15A6NJ78 407 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 A6NNC1 897 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF254O75437 659 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 LCATP04180 440 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 PSMB10P40306 273 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 WNT5AP41221 380 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 RGS6P49758 472 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 OR12D2P58182 307 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 SP5Q6BEB4 398 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 VHLLQ6RSH7 139 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ARL9Q6T311 187 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 TMPRSS11AQ6ZMR5 421 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 FAM57BQ71RH2 274 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 COMMD2Q86X83 199 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF101Q8IZC7 436 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 IL17RDQ8NFM7 739 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 C4orf45Q96LM5 186 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 PSMG3-AS1Q96PY0 264 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 DCLRE1CQ96SD1 692 aaKnown RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 MND1Q9BWT6 205 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 DUSP21Q9H596 190 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 NIPAL2Q9H841 368 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 EIF3KQ9UBQ5 218 aaKnown RBP11.73□□□□□ -0.53
CPNE1-227ENST00000498056 ERGIC3Q9Y282 383 aa11.73□□□□□ -0.53
CPNE1-227ENST00000498056 DSCAMO60469 2012 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 HRNRQ86YZ3 2850 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-227ENST00000498056 TMEM269A0A1B0GVZ9 245 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 LOC110117498-PIK3R3F6TDL0 507 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 GPRIN2O60269 458 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 SULT1C4O75897 302 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 APOC1P02654 83 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 MT-ND5P03915 603 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 LCKP06239 509 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 HTR1AP08908 422 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF35P13682 527 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 ERVS71-1P61550 626 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 SNAI3Q3KNW1 292 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 KRTAP27-1Q3LI81 207 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 SPATA46Q5T0L3 261 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 DEGS2Q6QHC5 323 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF704Q6ZNC4 412 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-227ENST00000498056 RHOUQ7L0Q8 258 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 PRSS48Q7RTY5 328 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 TMEM200AQ86VY9 491 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 OR52N1Q8NH53 320 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 PGAM5Q96HS1 289 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 YTHDF1Q9BYJ9 559 aaKnown RBP11.72□□□□□ -0.53
CPNE1-227ENST00000498056 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 PTTG3PQ9NZH4 202 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 CAB39Q9Y376 341 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-227ENST00000498056 SPEF1Q9Y4P9 236 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 R4GMQ9 66 aa11.72□□□□□ -0.53
CPNE1-227ENST00000498056 ROS1P08922 2347 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 TMEM129A0AVI4 362 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms