RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SAMD10Q9BYL1 202 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 RACGAP1Q9H0H5 632 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 EDA2RQ9HAV5 297 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 HYPKQ9NX55 129 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 PDP1Q9P0J1 537 aaPredicted RBP1.38□□□□□ -2.19
SMC4-227ENST00000497984 PSMC3IPQ9P2W1 217 aaPredicted RBP1.38□□□□□ -2.19
SMC4-227ENST00000497984 OR6C70A6NIJ9 312 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 TAAR5O14804 337 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 FKBP6O75344 327 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 RDH16O75452 317 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CST1P01037 141 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CRYGBP07316 175 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 PABPC4LP0CB38 370 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 CT45A6P0DMU7 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CT45A5P0DMU8 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CT45A7P0DMV0 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 SLC2A3P11169 496 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 U2AF2P26368 475 aaKnown RBP eCLIP1.37□□□□□ -2.197e-7■■■■■ 42.7
SMC4-227ENST00000497984 HNRNPH3P31942 346 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 RBM34P42696 430 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 TMED10P49755 219 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 RPL23P62829 140 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 BST1Q10588 318 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 FAM53BQ14153 422 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CT45A1Q5HYN5 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 GPR107Q5VW38 600 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 NPSR1Q6W5P4 371 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 USP50Q70EL3 339 aaPredicted RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 ZFP41Q8N8Y5 198 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 PRELID2Q8N945 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 OR5T1Q8NG75 326 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 OR11H7Q8NGC8 314 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 OR4M1Q8NGD0 313 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 CT45A3Q8NHU0 189 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 WDR34Q96EX3 536 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 NT5C3AQ9H0P0 336 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 DHX35Q9H5Z1 703 aaKnown RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 TMEM9BQ9NQ34 198 aa1.37□□□□□ -2.19
SMC4-227ENST00000497984 UXTQ9UBK9 157 aaPredicted RBP1.37□□□□□ -2.19
SMC4-227ENST00000497984 ANKRD12Q6UB98 2062 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 PDZK1P1A8MUH7 402 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 ZNF878C9JN71 531 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 MANBAO00462 879 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 CPLX1O14810 134 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 RAB29O14966 203 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 DEDDO75618 318 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 EIF4EP06730 217 aaKnown RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 GGT1P19440 569 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 CHMLP26374 656 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 TAGLN2P37802 199 aaKnown RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 MEF2CQ06413 473 aaPredicted RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 SIGLEC14Q08ET2 396 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 PRAMEF5Q5TYX0 476 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 PRAMEF6Q5VXH4 476 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 PRSS54Q6PEW0 395 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 SASS6Q6UVJ0 657 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 TMEM107Q6UX40 140 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 NBPF5PQ86XG9 351 aaPredicted RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 CSGALNACT2Q8N6G5 542 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 LRRC29Q8WV35 223 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 ZBED3Q96IU2 234 aaPredicted RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 ANKRD60Q9BZ19 345 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 MED4Q9NPJ6 270 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 HRASLS2Q9NWW9 162 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 CSDC2Q9Y534 153 aaKnown RBP1.36□□□□□ -2.19
SMC4-227ENST00000497984 ZNF407Q9C0G0 2248 aa1.36□□□□□ -2.19
SMC4-227ENST00000497984 IGHV1-69DA0A0B4J2H0 117 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 IGKV1-8A0A0C4DH67 115 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 A0A0J9YXV3 536 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 A6NDN8 102 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 GABRR3A8MPY1 467 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SMKR1H3BMG3 65 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 H7C417 338 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 TNFRSF11BO00300 401 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 NVLO15381 856 aaKnown RBP1.35□□□□□ -2.19
SMC4-227ENST00000497984 AQP8O94778 261 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 TSPAN13O95857 204 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SERPINE2P07093 398 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 ACSM4P0C7M7 580 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 CD37P11049 281 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 TNNI1P19237 187 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 NTF3P20783 257 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SYKP43405 635 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 STXBP1P61764 594 aaKnown RBP1.35□□□□□ -2.19
SMC4-227ENST00000497984 PRKCDQ05655 676 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 ZMYND11Q15326 602 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SSX2Q16385 188 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 MAJINQ3KP22 176 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SMARCD3Q6STE5 483 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 IQCKQ8N0W5 287 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 UBE2J2Q8N2K1 259 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 NECAB1Q8N987 351 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 OR9K2Q8NGE7 335 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 OR52E2Q8NGJ4 325 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 OR1J4Q8NGS1 313 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 PHOSPHO2Q8TCD6 241 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 SLC29A1Q99808 456 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 GCOM2Q9BZD3 368 aaPredicted RBP1.35□□□□□ -2.19
SMC4-227ENST00000497984 TMEM27Q9HBJ8 222 aa1.35□□□□□ -2.19
SMC4-227ENST00000497984 CSNK1G1Q9HCP0 422 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms