RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 MPDZO75970 2070 aa3.14□□□□□ -1.91
MDM2-220ENST00000496959 ACANP16112 2415 aa3.14□□□□□ -1.91
MDM2-220ENST00000496959 CSMD1Q96PZ7 3565 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 A0A087X0T9 212 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 A0A1W2PRQ8 180 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 A8MUI8 341 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 H0YGG7 62 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 H7C0C1 242 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 PRMT5O14744 637 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 NDC80O14777 642 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 FMO6PO60774 539 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 NSA2O95478 260 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 MBD3O95983 291 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 CATP04040 527 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 FAM228BP0C875 321 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ERGP11308 486 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 IGLL1P15814 213 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 MSNP26038 577 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 PEBP1P30086 187 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 HPDP32754 393 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 ADRA1AP35348 466 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 CDKN2BP42772 138 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ATP5OP48047 213 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 RPS15AP62244 130 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 TFF3Q07654 80 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ACTN3Q08043 901 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 MESDQ14696 234 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ZNF674Q2M3X9 581 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 DEFB113Q30KQ7 82 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 TTLL9Q3SXZ7 439 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 AGKQ53H12 422 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ARSKQ6UWY0 536 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 STAC2Q6ZMT1 411 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 KRT77Q7Z794 578 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 SLC13A5Q86YT5 568 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 CRLF3Q8IUI8 442 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 PRSS58Q8IYP2 241 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 KATNAL2Q8IYT4 538 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 LRRC75A-AS1Q8N1F1 130 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 TMEM156Q8N614 296 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ZFP62Q8NB50 900 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 OR13C4Q8NGS5 318 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 MARCH1Q8TCQ1 289 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 SKA2Q8WVK7 121 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 KRT35Q92764 455 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 DTNBP1Q96EV8 351 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 DNAJC1Q96KC8 554 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 SPATA13Q96N96 652 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 CCDC77Q9BR77 488 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 DESI2Q9BSY9 194 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 NARFLQ9H6Q4 476 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ANKHQ9HCJ1 492 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 GALPQ9UBC7 116 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 BCAP29Q9UHQ4 241 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 ZNF223Q9UK11 482 aaPredicted RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 IFT52Q9Y366 437 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 SCN3AQ9NY46 2000 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 FLNAP21333 2647 aaKnown RBP3.13□□□□□ -1.91
MDM2-220ENST00000496959 ZFHX3Q15911 3703 aa3.13□□□□□ -1.91
MDM2-220ENST00000496959 hCG_1818297A0A087WSY0 165 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 KCNE1BA0A087WTH5 132 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 TMEM89A2RUT3 159 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 HCRTR1O43613 425 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 CDC40O60508 579 aaKnown RBP eCLIP3.12□□□□□ -1.912e-6■■□□□ 11.6
MDM2-220ENST00000496959 HCN1O60741 890 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 F10P00742 488 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 AGTP01019 485 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 PTMAP06454 111 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 RPS3P23396 243 aaKnown RBP eCLIP3.12□□□□□ -1.91
MDM2-220ENST00000496959 FOXN2P32314 431 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 STARP49675 285 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 HADHBP55084 474 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 SLC26A5P58743 744 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 VLDLRP98155 873 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 PLGLB1Q02325 96 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 PRDX1Q06830 199 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 CDH17Q12864 832 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 NSDHLQ15738 373 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 ZSWIM7Q19AV6 140 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 FBXL19-AS1Q494R0 122 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 RIPPLY2Q5TAB7 128 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 PTRHD1Q6GMV3 140 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 LRRC8BQ6P9F7 803 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 ABHD13Q7L211 337 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 APTXQ7Z2E3 356 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 ANKRD37Q7Z713 158 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 RPS19BP1Q86WX3 136 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 CCDC170Q8IYT3 715 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 CYP4Z2PQ8N1L4 340 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 CLDN19Q8N6F1 224 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 ARFGAP2Q8N6H7 521 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 PLPP5Q8NEB5 264 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 OR2A1Q8NGT9 310 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 OR51Q1Q8NH59 317 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 ZNF721Q8TF20 911 aa3.12□□□□□ -1.91
MDM2-220ENST00000496959 RNASE6Q93091 150 aaKnown RBP3.12□□□□□ -1.91
MDM2-220ENST00000496959 MYDGFQ969H8 173 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms