RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ATP6AP2A0A1C7CYW4 349 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM89A2RUT3 159 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 LRIT2A6NDA9 550 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2W5A6NFC9 320 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ARL5CA6NH57 179 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 COLCA2A8K830 154 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 E5RGE8 158 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 E7ENX8 843 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 M0R233 179 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MANBAO00462 879 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 DVL1O14640 695 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MYL12BO14950 172 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 NBR2O15453 112 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 AIREO43918 545 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 RDH16O75452 317 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ATP6AP2O75787 350 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 GABARAPO95166 117 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 LRATO95237 230 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 RAB36O95755 333 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 JCHAINP01591 159 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 AMBPP02760 352 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ORM1P02763 201 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ISG15P05161 165 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ADH4P08319 380 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 NMBP08949 121 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CD79AP11912 226 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MYL12AP19105 171 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 BMP5P22003 454 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 EPHA2P29317 976 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 GDF5P43026 501 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 NPBWR1P48145 328 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 METAP2P50579 478 aaKnown RBP eCLIP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 GEMP55040 296 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 TAS2R43P59537 309 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 EIF5AP63241 154 aaKnown RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MRPS34P82930 218 aaKnown RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CXCL9Q07325 125 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 HERPUD1Q15011 391 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 LTC4SQ16873 150 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CDO1Q16878 200 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF404Q494X3 552 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CST9Q5W186 159 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM225Q6GV28 225 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 FAM71F2Q6NXP2 309 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 COX15Q7KZN9 410 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 H2BFWTQ7Z2G1 175 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 NRARPQ7Z6K4 114 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 DOLPP1Q86YN1 238 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 PLXDC1Q8IUK5 500 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ZDHHC23Q8IYP9 409 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF664Q8N3J9 261 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ENGASEQ8NFI3 743 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 OR13J1Q8NGT2 312 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MCFD2Q8NI22 146 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 SMAP2Q8WU79 429 aaPredicted RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 SOCS4Q8WXH5 440 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 TRMT61AQ96FX7 289 aaKnown RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 PYURFQ96I23 114 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 GUCD1Q96NT3 240 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MUS81Q96NY9 551 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ERMAPQ96PL5 475 aaPredicted RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CPXM1Q96SM3 734 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 SIGMAR1Q99720 223 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 C20orf144Q9BQM9 153 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 CDCA4Q9BXL8 241 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC39A8Q9C0K1 460 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 SPATC1LQ9H0A9 340 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 C11orf54Q9H0W9 315 aaPredicted RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MMP28Q9H239 520 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 PIGMQ9H3S5 423 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 KCNK15Q9H427 330 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 METTL17Q9H7H0 456 aaPredicted RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 RNF121Q9H920 327 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 ELOVL5Q9NYP7 299 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 A4GNTQ9UNA3 340 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 FOXJ3Q9UPW0 622 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 FOXA2Q9Y261 457 aaPredicted RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 B3GALT5Q9Y2C3 310 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 LRP12Q9Y561 859 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 MYO5BQ9ULV0 1848 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 HEG1Q9ULI3 1381 aa2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 RPRD2Q5VT52 1461 aaKnown RBP2.75□□□□□ -1.97
SNRNP48-202ENST00000496946 DENND4AQ7Z401 1863 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 FEZF1A0PJY2 475 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ANTXRLA6NF34 631 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM200CA6NKL6 621 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF726A6NNF4 738 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 YJEFN3A6XGL0 299 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HHLA1C9JL84 531 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RPL36A-HNRNPH2H7BZ11 118 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2T1O43869 369 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC19A2O60779 497 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 DUSP11O75319 330 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CDS2O95674 445 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GPANK1O95872 356 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HPRT1P00492 218 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 IFNA1P01562 189 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 DCNP07585 359 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RHOCP08134 193 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms