RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MED30Q96HR3 178 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 SEC22CQ9BRL7 303 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
GARNL3-220ENST00000496711 SCPEP1Q9HB40 452 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 PNRC2Q9NPJ4 139 aaKnown RBP11.56□□□□□ -0.56
GARNL3-220ENST00000496711 DLL4Q9NR61 685 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 SCP2D1Q9UJQ7 156 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 MGAT4AQ9UM21 535 aa11.56□□□□□ -0.56
GARNL3-220ENST00000496711 MASP2O00187 686 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZIC3O60481 467 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CREBL2O60519 120 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 VAMP5O95183 116 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 IL5P05113 134 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CPN1P15169 458 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ANXA7P20073 488 aaKnown RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OTX2P32243 289 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 MPLP40238 635 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CSNK1A1P48729 337 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CHAF1BQ13112 559 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 POU4F3Q15319 338 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CLEC1AQ8NC01 280 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OR51E1Q8TCB6 317 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 SGCZQ96LD1 299 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 GINS4Q9BRT9 223 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 NAA11Q9BSU3 229 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 METTL17Q9H7H0 456 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 TMEM138Q9NPI0 162 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 NPDC1Q9NQX5 325 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 GLTPQ9NZD2 209 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF69Q9UC07 566 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 TCFL5Q9UL49 500 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 A0A1B0GTI1 187 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 SNRPGP15A8MWD9 76 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 NPIPA2E9PIF3 369 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 NPIPA3F8WFD2 350 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 RER1O15258 196 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CBR3O75828 277 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF20P17024 532 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 RAB3AP20336 220 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CX3CR1P49238 355 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 RGS19P49795 217 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 PRKXP51817 358 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF121P58317 390 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 TAS2R19P59542 299 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 GRB2P62993 217 aaKnown RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 PMPCAQ10713 525 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 C10orf128Q5T292 105 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
GARNL3-220ENST00000496711 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF529Q6P280 563 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 DBX2Q6ZNG2 339 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 SLC22A24Q8N4F4 322 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OR8B12Q8NGG6 310 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OR4D10Q8NGI6 311 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OR5D14Q8NGL3 314 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 OR6N1Q8NGY5 312 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 SEH1LQ96EE3 360 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 GAL3ST1Q99999 423 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 PIGQQ9BRB3 760 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 UQCC2Q9BRT2 126 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 CNTD2Q9H8S5 307 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 PADI1Q9ULC6 663 aa11.55□□□□□ -0.56
GARNL3-220ENST00000496711 NCOA6Q14686 2063 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-220ENST00000496711 IGHV3-15A0A0B4J1V0 119 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 GJE1A6NN92 205 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 PYCARD-AS1I3L0S3 204 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 BPNT1O95861 308 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 HPP00738 406 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 CD3DP04234 171 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 ERCC1P07992 297 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-220ENST00000496711 ICAM2P13598 275 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 MSR1P21757 451 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 DNASE1P24855 282 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 SELENOPP49908 381 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
GARNL3-220ENST00000496711 RAC1P63000 192 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 OR10K2Q6IF99 312 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 C6orf15Q6UXA7 325 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF767PQ75MW2 155 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 ABHD12BQ7Z5M8 362 aaPredicted RBP11.54□□□□□ -0.56
GARNL3-220ENST00000496711 COMMD2Q86X83 199 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 GABRG1Q8N1C3 465 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 SPICQ8N5J4 248 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 OR11H4Q8NGC9 324 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 OR9K2Q8NGE7 335 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 CT55Q8WUE5 264 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 GPR137Q96N19 417 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 STRADBQ9C0K7 418 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 SLCO5A1Q9H2Y9 848 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 MGAT4CQ9UBM8 478 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 PCSK5Q92824 1860 aa11.54□□□□□ -0.56
GARNL3-220ENST00000496711 METTL21EPA6NDL7 271 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms