RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TEKQ02763 1124 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 AQP6Q13520 282 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 GINS1Q14691 196 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 SGCAQ16586 387 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 MOGQ16653 247 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 TSTQ16762 297 aaKnown RBP12.23□□□□□ -0.45
CXCL12-208ENST00000496375 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 FAHD2BQ6P2I3 314 aaPredicted RBP12.23□□□□□ -0.45
CXCL12-208ENST00000496375 USP51Q70EK9 711 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 PQLC1Q8N2U9 271 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 IQCF1Q8N6M8 205 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 FAHD2AQ96GK7 314 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 RBM4BQ9BQ04 359 aaKnown RBP12.23□□□□□ -0.45
CXCL12-208ENST00000496375 GABARAPL3Q9BY60 117 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 OR2H1Q9GZK4 316 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 RNPEPL1Q9HAU8 725 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 KRT84Q9NSB2 600 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 DECR2Q9NUI1 292 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 KCNG2Q9UJ96 466 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 TIMM10BQ9Y5J6 103 aa12.23□□□□□ -0.45
CXCL12-208ENST00000496375 A0A0A6YYJ9 748 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 C5orf49A4QMS7 147 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ZAR1LA6NP61 321 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 CLDN25C9JDP6 229 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 E9PQ18 207 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 PNPP00491 289 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ALPLP05186 524 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ANPEPP15144 967 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SPI1P17947 270 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 WNT5AP41221 380 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 CENPAP49450 140 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ZNF81P51508 661 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SCRN3Q0VDG4 424 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 PTGES3Q15185 160 aaKnown RBP12.22□□□□□ -0.45
CXCL12-208ENST00000496375 PCK2Q16822 640 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ZNF718Q3SXZ3 478 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 LINC01590Q5TEZ4 76 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SLX4IPQ5VYV7 408 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 CYB561A3Q8NBI2 242 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SEMA6DQ8NFY4 1073 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 AKR7LQ8NHP1 331 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 POM121L2Q96KW2 1035 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 CIB1Q99828 191 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 FN3KQ9H479 309 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SAP30LQ9HAJ7 183 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
CXCL12-208ENST00000496375 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 MRPL22Q9NWU5 206 aaKnown RBP12.22□□□□□ -0.45
CXCL12-208ENST00000496375 EIF3KQ9UBQ5 218 aaKnown RBP12.22□□□□□ -0.45
CXCL12-208ENST00000496375 LHFPL6Q9Y693 200 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
CXCL12-208ENST00000496375 LOC100509620A0A075B734 347 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 SPRY3O43610 288 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 MITFO75030 526 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-208ENST00000496375 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-208ENST00000496375 MPZL1O95297 269 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 GCH1P30793 250 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 GGT2P36268 569 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 MPV17P39210 176 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 GDI2P50395 445 aaKnown RBP12.21□□□□□ -0.45
CXCL12-208ENST00000496375 BLVRAP53004 296 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 EFNB1P98172 346 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 HFEQ30201 348 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 TMEM255AQ5JRV8 349 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 TEX30Q5JUR7 227 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 C12orf73Q69YU5 71 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 C12orf54Q6X4T0 127 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 ZNRF4Q8WWF5 429 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 IPCEF1Q8WWN9 437 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-208ENST00000496375 PTP4A1Q93096 173 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 RAB39BQ96DA2 213 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 MARS2Q96GW9 593 aaKnown RBP12.21□□□□□ -0.45
CXCL12-208ENST00000496375 MARCH7Q9H992 704 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 G6PC2Q9NQR9 355 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 WIPI2Q9Y4P8 454 aa12.21□□□□□ -0.45
CXCL12-208ENST00000496375 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 WNK2Q9Y3S1 2297 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 SAC3D1A6NKF1 404 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 PRODHO43272 600 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 PLPP2O43688 288 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 AVPP01185 164 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 IGHV1-46P01743 117 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 PAICSP22234 425 aaKnown RBP12.2□□□□□ -0.46
CXCL12-208ENST00000496375 SLC2A5P22732 501 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 POU1F1P28069 291 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 EPHA2P29317 976 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 MMP15P51511 669 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 ALDH3A2P51648 485 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 UNQ6126/PRO20091Q6UXV3 157 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 C1orf229Q6ZS94 237 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-208ENST00000496375 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-208ENST00000496375 ALDH16A1Q8IZ83 802 aa12.2□□□□□ -0.46
CXCL12-208ENST00000496375 PROKR2Q8NFJ6 384 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms