RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 EMC3Q9P0I2 261 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 B3GAT1Q9P2W7 334 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 NUFIP1Q9UHK0 495 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 CYB5R1Q9UHQ9 305 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ING1Q9UK53 422 aaPredicted RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 WDR87Q6ZQQ6 2873 aa6.15□□□□□ -1.43
USP39-219ENST00000496047 DNAJC13O75165 2243 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 KNTC1P50748 2209 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 SPTBN2O15020 2390 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DMXL1Q9Y485 3027 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 B4DXG7 233 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 INMT-MINDY4F8WBC2 141 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 G3V3Y1 287 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 KLRC4-KLRK1H3BQV0 150 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PIN1P1O15428 100 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DHHO43323 396 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 EFNA2O43921 213 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PRAF2O60831 178 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 MTRF1O75570 445 aaKnown RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 FARS2O95363 451 aaKnown RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 WDPCPO95876 746 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 RAB3AP20336 220 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 HTR2CP28335 458 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 BDKRB2P30411 391 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DDOSTP39656 456 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 GDNFP39905 211 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 CX3CR1P49238 355 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 P2RY4P51582 365 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 CARD18P57730 90 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PCBD1P61457 104 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 MRPS15P82914 257 aaKnown RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 MFGE8Q08431 387 aaPredicted RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 SCRN3Q0VDG4 424 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DBPQ10586 325 aaPredicted RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 MADCAM1Q13477 382 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 INPP5JQ15735 1006 aaPredicted RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 SGCAQ16586 387 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 ZFP69Q49AA0 526 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DCAF10Q5QP82 559 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 RAB12Q6IQ22 244 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 CREB3L2Q70SY1 520 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DOK3Q7L591 496 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 GLRX5Q86SX6 157 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 LRRTM1Q86UE6 522 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 ELMOD2Q8IZ81 293 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 CMTM4Q8IZR5 234 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 Q8N3U1 123 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 TMEM178AQ8NBL3 297 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 IL17RDQ8NFM7 739 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 OR5H6Q8NGV6 325 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 OR2V1Q8NHB1 315 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 ASB5Q8WWX0 329 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 AKAP1Q92667 903 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP39-219ENST00000496047 TMEM54Q969K7 222 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 TRIM63Q969Q1 353 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 SPTSSAQ969W0 71 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PGAM5Q96HS1 289 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 AMELYQ99218 206 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 NPAS1Q99742 590 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PRRG4Q9BZD6 226 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 PBOV1Q9GZY1 135 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 MMP28Q9H239 520 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 TAS2R4Q9NYW5 299 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 FOXJ2Q9P0K8 574 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 NLKQ9UBE8 527 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 ITGB1BP2Q9UKP3 347 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 MCTS1Q9ULC4 181 aaKnown RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 SLC22A13Q9Y226 551 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 USP9XQ93008 2570 aaPredicted RBP6.14□□□□□ -1.43
USP39-219ENST00000496047 MED12Q93074 2177 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 MED13Q9UHV7 2174 aa6.14□□□□□ -1.43
USP39-219ENST00000496047 DMDP11532 3685 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 A0A096LPE4 126 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 A0A0J9YW62 118 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 A0A1W2PPZ6 126 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SULT1C2O00338 296 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 P2RY10O00398 339 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 PLA2G10O15496 165 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 XRCC3O43542 346 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ZIC3O60481 467 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RBBP9O75884 186 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 MPZL1O95297 269 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 OPN1LWP04000 364 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ARSBP15848 533 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RAB6AP20340 208 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 STOMP27105 288 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RCVRNP35243 200 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 KIR2DL3P43628 341 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SLC6A9P48067 706 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RFX2P48378 723 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 POU3F4P49335 361 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 AGFG1P52594 562 aaKnown RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 ZNF133P52736 654 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 RAG2P55895 527 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 TAS2R20P59543 309 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 H3F3AP84243 136 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ECH1Q13011 328 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SNTB2Q13425 540 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms