RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PRB2P02812 416 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 SHBGP04278 402 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CSF3P09919 207 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 UBTFL6P0CB48 400 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 FAM106CPP0CH98 169 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GAGE12FP0CL80 117 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GAGE12GP0CL81 117 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GAGE12IP0CL82 117 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 LAMP1P11279 417 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 HLA-DOBP13765 273 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 IRF2P14316 349 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 HPGDP15428 266 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 RPS4Y1P22090 263 aaKnown RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 USF1P22415 310 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 C21orf33P30042 268 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 IL2RGP31785 369 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 NR4A2P43354 598 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 RFX2P48378 723 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 ENTPD1P49961 510 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CCR4P51679 360 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 EFNA4P52798 201 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 ATP12AP54707 1039 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 DSCR9P59020 149 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GMFBP60983 142 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 HBA1P69905 142 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 H3F3AP84243 136 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GAGE1Q13065 139 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GAGE4Q13068 117 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GK2Q14410 553 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 PDK3Q15120 406 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 MAPK11Q15759 364 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 ZNF141Q15928 474 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GABRA6Q16445 453 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 MAPK14Q16539 360 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 WHAMMP3Q1A5X7 153 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TMEM176BQ3YBM2 270 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 ELFN2Q5R3F8 820 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 PDSS1Q5T2R2 415 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 AGAP6Q5VW22 663 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 PRAMEF7Q5VXH5 474 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 FBXW9Q5XUX1 488 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 AP1ARQ63HQ0 302 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CYB5R2Q6BCY4 276 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 DLEU7Q6UYE1 221 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 FRRS1Q6ZNA5 592 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TRMT10CQ7L0Y3 403 aaKnown RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 ZER1Q7Z7L7 766 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 MYPOPQ86VE0 399 aaPredicted RBP3.6□□□□□ -1.83
VPS52-222ENST00000495981 SATL1Q86VE3 508 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 P2RY8Q86VZ1 359 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TMEM219Q86XT9 240 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 ODF3L1Q8IXM7 274 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CLECL1Q8IZS7 167 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 BATF2Q8N1L9 274 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 RFLNBQ8N5W9 214 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 KRTCAP2Q8N6L1 136 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR7A2PQ8NGA2 310 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR52E4Q8NGH9 312 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR5AK3PQ8NH89 298 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TMEM255BQ8WV15 326 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 ST8SIA1Q92185 356 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 APH1AQ96BI3 265 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CCDC126Q96EE4 140 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 C3orf30Q96M34 536 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR7D2Q96RA2 312 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 SDF2Q99470 211 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 RHNO1Q9BSD3 238 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 OR11A1Q9GZK7 315 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 BPESC1Q9GZL8 116 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 EGLN1Q9GZT9 426 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CSTL1Q9H114 145 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 SLC17A5Q9NRA2 495 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 GPR173Q9NS66 373 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 FAM118AQ9NWS6 357 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 CHRNA9Q9UGM1 479 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 BAIAP2L1Q9UHR4 511 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 RABL2BQ9UNT1 228 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 AMDHD2Q9Y303 409 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TMED5Q9Y3A6 229 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 FLVCR1Q9Y5Y0 555 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 DSPPQ9NZW4 1301 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 TANC2Q9HCD6 1990 aa3.6□□□□□ -1.83
VPS52-222ENST00000495981 PLECQ15149 4684 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 IGLV5-39A0A0G2JS06 123 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 TMEM129A0AVI4 362 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 CLDN24A6NM45 220 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 E9PI62 339 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 M0R1B8 84 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 NDUFS8O00217 210 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SLC28A1O00337 649 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 TNFRSF13BO14836 293 aaPredicted RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 EIF4E2O60573 245 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 FCMRO60667 390 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SCN2BO60939 215 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 PEX11AO75192 247 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 PDE5AO76074 875 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 NUDT14O95848 222 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms