RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 ZNF92Q03936 586 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 USF2Q15853 346 aaPredicted RBP2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 BEX5Q5H9J7 111 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 TMEM31Q5JXX7 168 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 LRRC66Q68CR7 880 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 CLEC6AQ6EIG7 209 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 Q6ZR03 302 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 SHISA6Q6ZSJ9 500 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 USP50Q70EL3 339 aaPredicted RBP2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 CDR2LQ86X02 465 aaPredicted RBP2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 MREGQ8N565 214 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 CEP112Q8N8E3 955 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 OR9K2Q8NGE7 335 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 NDNFQ8TB73 568 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 FAM81AQ8TBF8 368 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 TEX47Q8TBZ9 253 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 LRRC20Q8TCA0 184 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 CAPSLQ8WWF8 208 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 TMEM54Q969K7 222 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 OR10C1Q96KK4 312 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 PRRC1Q96M27 445 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 RNF157Q96PX1 679 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 PANX1Q96RD7 426 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 SLC29A1Q99808 456 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 GGA2Q9UJY4 613 aa2.77□□□□□ -1.97
NCKAP1-208ENST00000495619 A0A0B4J2A0 478 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 LOC105371267A0A1B0GV96 52 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 GOLGA6L10A6NI86 522 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 SCAMP2O15127 329 aaKnown RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 RNF13O43567 381 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 PSTPIP1O43586 416 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 SLC25A14O95258 325 aaPredicted RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 MCF2P10911 925 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 SLC2A3P11169 496 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 HOXB8P17481 243 aaPredicted RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 CASP14P31944 242 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 IFNA8P32881 189 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 CRATP43155 626 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 RFX3P48380 749 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 NCBP2P52298 156 aaKnown RBP eCLIP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 PLP1P60201 277 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 KCNJ2P63252 427 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 DGCR6Q14129 220 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 MLIPQ5VWP3 458 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 PLCXD3Q63HM9 321 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 SLC25A25Q6KCM7 469 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 TMEM179Q6ZVK1 233 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 EIF3MQ7L2H7 374 aaKnown RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 NDUFAF7Q7L592 441 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 STRADAQ7RTN6 431 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 LINC00523Q86TU6 105 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 PLCZ1Q86YW0 608 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 STPG2Q8N412 459 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 HSD17B11Q8NBQ5 300 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 TTLQ8NG68 377 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 ZNF317Q96PQ6 595 aaPredicted RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 UPF3BQ9BZI7 483 aaKnown RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 FBXO44Q9H4M3 255 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 RPP21Q9H633 154 aaKnown RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 AUNIPQ9H7T9 357 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 MRPL22Q9NWU5 206 aaKnown RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 EURLQ9NYK6 297 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 NKIRAS1Q9NYS0 192 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 GCNT4Q9P109 453 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 ZNF629Q9UEG4 869 aaPredicted RBP2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 SHPKQ9UHJ6 478 aa2.76□□□□□ -1.97
NCKAP1-208ENST00000495619 ANKRD30AQ9BXX3 1397 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 GOLGA8QA0A0J9YX86 632 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 A0A1W2PPV4 95 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 GPR171O14626 319 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 NDUFS6O75380 124 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 CCNB2O95067 398 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 MLNP12872 115 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 IDO1P14902 403 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 CD40LGP29965 261 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 SERPINB5P36952 375 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 RANBP1P43487 201 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 RPS5P46782 204 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 CSNK1EP49674 416 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 RORCP51449 518 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 TPMTP51580 245 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 YWHAGP61981 247 aaKnown RBP eCLIP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 PSMC5P62195 406 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 RAP1AP62834 184 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 RPS15P62841 145 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 TNNC1P63316 161 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 S100A12P80511 92 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 MRPS22P82650 360 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 ART3Q13508 389 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 PIGHQ14442 188 aaPredicted RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 DNAL1Q4LDG9 190 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 PRAMEF5Q5TYX0 476 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 PRAMEF6Q5VXH4 476 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 Q5W150 140 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 COPS6Q7L5N1 327 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 BHLHA15Q7RTS1 189 aaPredicted RBP2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 DCXRQ7Z4W1 244 aa2.75□□□□□ -1.97
NCKAP1-208ENST00000495619 LUZP2Q86TE4 346 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms