RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 LSM6P62312 80 aaKnown RBP11.84□□□□□ -0.51
VARS-228ENST00000495010 PRKCDQ05655 676 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
VARS-228ENST00000495010 CYBRD1Q53TN4 286 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 RABL3Q5HYI8 236 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 OTPQ5XKR4 325 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 GDPGP1Q6ZNW5 385 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 GLB1L2Q8IW92 636 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 PNLDC1Q8NA58 520 aaKnown RBP11.84□□□□□ -0.51
VARS-228ENST00000495010 C19orf18Q8NEA5 215 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 OR13C2Q8NGS9 318 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 C10orf82Q8WW14 230 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 LZICQ8WZA0 190 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 Q96M85 177 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 RHCGQ9UBD6 479 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 TMCC3Q9ULS5 477 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 A4GNTQ9UNA3 340 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
VARS-228ENST00000495010 ADAM18Q9Y3Q7 739 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 ELOVL7A1L3X0 281 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 RER1O15258 196 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 TSPAN15O95858 294 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 CD14P08571 375 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 CTLA4P16410 223 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 GATA4P43694 442 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 YAP1P46937 504 aaKnown RBP11.83□□□□□ -0.52
VARS-228ENST00000495010 CENPAP49450 140 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 RAD23AP54725 363 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 TRAM2Q15035 370 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 MESTQ5EB52 335 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 ZNF730Q6ZMV8 503 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 ZNF841Q6ZN19 808 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.83□□□□□ -0.52
VARS-228ENST00000495010 RNF113BQ8IZP6 322 aaKnown RBP11.83□□□□□ -0.52
VARS-228ENST00000495010 CELF2-AS1Q8N7Q2 184 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 BOLLQ8N9W6 283 aaKnown RBP11.83□□□□□ -0.52
VARS-228ENST00000495010 GJC3Q8NFK1 279 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 LHX4Q969G2 390 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 TBX15Q96SF7 602 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 WDR76Q9H967 626 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.52
VARS-228ENST00000495010 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 FAM20BO75063 409 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 ALX3O95076 343 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 PSMB10P40306 273 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 PROK1P58294 105 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 OR8B8Q15620 311 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 ZBED5Q49AG3 693 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 FBLN7Q53RD9 439 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 CALHM3Q86XJ0 350 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 OR8J3Q8NGG0 315 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 Q8TCH9 128 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 ZNF583Q96ND8 569 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 COQ7Q99807 217 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 SYT4Q9H2B2 425 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 FN3KRPQ9HA64 309 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 TRIM36Q9NQ86 728 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 RNF7Q9UBF6 113 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 FAM96BQ9Y3D0 163 aa11.82□□□□□ -0.52
VARS-228ENST00000495010 ADAM20O43506 726 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 IFNW1P05000 195 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 CSF1P09603 554 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 MMP9P14780 707 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 KDELR2P33947 212 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 CD200P41217 278 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 GPR4P46093 362 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 IER3P46695 156 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 SELENOWP63302 87 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 MALLQ13021 153 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 MAB21L1Q13394 359 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 KRR1Q13601 381 aaKnown RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 FHL1Q13642 323 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 OR8G1Q15617 311 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 PRAMEF6Q5VXH4 476 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 HIST2H2BDQ6DRA6 164 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 SFRP4Q6FHJ7 346 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 DHRS7BQ6IAN0 325 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 OFCC1Q8IZS5 231 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 SPRYD4Q8WW59 207 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 STON2Q8WXE9 905 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 ACOT11Q8WXI4 607 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 NMNAT1Q9HAN9 279 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 RPS6KA6Q9UK32 745 aa11.81□□□□□ -0.52
VARS-228ENST00000495010 CAB39Q9Y376 341 aaPredicted RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 NOP16Q9Y3C1 178 aaKnown RBP11.81□□□□□ -0.52
VARS-228ENST00000495010 TRAV38-1A0A0B4J264 116 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 A0A0U1RQK1 487 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms