RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CPNE2Q96FN4 548 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 SLC5A6Q9Y289 635 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 COL5A1P20908 1838 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 A0A0A6YYC8 382 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 LOC107986453A0A1B0GWG9 222 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 I3L1I5 382 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 MPZL1O95297 269 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 FCGR3AP08637 254 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 MAOAP21397 527 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 CX3CR1P49238 355 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 RUNX3Q13761 415 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 PTCRAQ6ISU1 281 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 MARCH3Q86UD3 253 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 OR2I1PQ8NGU4 316 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 MARCH1Q8TCQ1 289 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 PHOSPHO1Q8TCT1 267 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 BMFQ96LC9 184 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 KXD1Q9BQD3 176 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 SLC5A7Q9GZV3 580 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 SEC61A2Q9H9S3 476 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 C2orf74A8MZ97 194 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 C11orf98E9PRG8 122 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 FARS2O95363 451 aaKnown RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 SFTA3P0C7M3 94 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 SMIM6P0DI80 62 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 ZNF44P15621 663 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 OR13C3Q8NGS6 347 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 ZNF563Q8TA94 476 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 NKD1Q969G9 470 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 AQP10Q96PS8 301 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 GAS2L1Q99501 681 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 C5orf51A6NDU8 294 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 ZNF264O43296 627 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 HLA-DQA2P01906 255 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 CD2P06729 351 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 ELAVL1Q15717 326 aaKnown RBP13.71□□□□□ -0.21
SDF4-207ENST00000494748 TOMM34Q15785 309 aaPredicted RBP13.71□□□□□ -0.21
SDF4-207ENST00000494748 ACKR1Q16570 336 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 SGCAQ16586 387 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 LAT2Q9GZY6 243 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 UBQLN4Q9NRR5 601 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 PRR13Q9NZ81 148 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 EDARQ9UNE0 448 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 R4GMQ9 66 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 A0A1W2PPE3 182 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 MBTPS2O43462 519 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 SLC16A7O60669 478 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 FABP1P07148 127 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 RIDAP52758 137 aaKnown RBP13.71□□□□□ -0.21
SDF4-207ENST00000494748 F2RL1P55085 397 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
SDF4-207ENST00000494748 IL15RAQ13261 267 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 PEA15Q15121 130 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 FAM219AQ8IW50 185 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 OR52N5Q8NH56 324 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 PLA2G2FQ9BZM2 168 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 HRH4Q9H3N8 390 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 C5orf66Q9H5L9 145 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 RAB22AQ9UL26 194 aa13.71□□□□□ -0.21
SDF4-207ENST00000494748 GNB3P16520 340 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 KIR2DL1P43626 348 aaPredicted RBP13.7□□□□□ -0.22
SDF4-207ENST00000494748 IGSF11Q5DX21 431 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 BTNL8Q6UX41 500 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 SAT2Q96F10 170 aaPredicted RBP13.7□□□□□ -0.22
SDF4-207ENST00000494748 MEGF11A6BM72 1044 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 CEACAM18A8MTB9 384 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 ADAP1O75689 374 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 PMP2P02689 132 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 NUBPLQ8TB37 319 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 DGAT2Q96PD7 388 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 TINAGQ9UJW2 476 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 ZNF217O75362 1048 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 VSIG8P0DPA2 414 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 ABCD3P28288 659 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 RPL27P61353 136 aaKnown RBP13.7□□□□□ -0.22
SDF4-207ENST00000494748 RBM39Q14498 530 aaKnown RBP13.7□□□□□ -0.22
SDF4-207ENST00000494748 PRSS54Q6PEW0 395 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 HIST1H2BAQ96A08 127 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 WDR92Q96MX6 357 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
SDF4-207ENST00000494748 A0A0A6YYD4 124 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms