RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FPR3P25089 353 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 PYCR1P32322 319 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 IFNGR2P38484 337 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 RPS27P42677 84 aaKnown RBP8.09□□□□□ -1.11
MSH5-218ENST00000494646 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 ZMAT1Q5H9K5 638 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 SLC18B1Q6NT16 456 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 CFAP77Q6ZQR2 320 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 FITM2Q8N6M3 262 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 ZNF283Q8N7M2 679 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
MSH5-218ENST00000494646 CYB561A3Q8NBI2 242 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 BHLHE23Q8NDY6 225 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 SLC26A10Q8NG04 563 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 OR10AD1Q8NGE0 317 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 OR51L1Q8NGJ5 315 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 OR2AJ1Q8NGZ0 328 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 ZNRF4Q8WWF5 429 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 C22orf15Q8WYQ4 148 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
MSH5-218ENST00000494646 NSL1Q96IY1 281 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 COG8Q96MW5 612 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 ZNF582Q96NG8 517 aaPredicted RBP8.09□□□□□ -1.11
MSH5-218ENST00000494646 COQ7Q99807 217 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 TUBG2Q9NRH3 451 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 MRPL22Q9NWU5 206 aaKnown RBP8.09□□□□□ -1.11
MSH5-218ENST00000494646 F5H5P2 479 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 TRAPPC2LH3BP13 241 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 SURF4O15260 269 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 MLNRO43193 412 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 KRT36O76013 467 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 CYB5R3P00387 301 aaPredicted RBP8.08□□□□□ -1.12
MSH5-218ENST00000494646 IGHV2-70P01814 119 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 ZNF823P16415 610 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 SELEP16581 610 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 ATP6V1B2P21281 511 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 RGS6P49758 472 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 HMGA2P52926 109 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 SEC61A1P61619 476 aaKnown RBP8.08□□□□□ -1.12
MSH5-218ENST00000494646 MS4A2Q01362 244 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 COX10Q12887 443 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 SLC36A3Q495N2 470 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 FBXW12Q6X9E4 464 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 LRRC28Q86X40 367 aaPredicted RBP8.08□□□□□ -1.12
MSH5-218ENST00000494646 KLHL36Q8N4N3 616 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 OR8G5Q8NG78 346 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 OR13G1Q8NGZ3 307 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 NANPQ8TBE9 248 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
MSH5-218ENST00000494646 SLCO4A1Q96BD0 722 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 CCT8L2Q96SF2 557 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 BTBD10Q9BSF8 475 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 PLA2G12AQ9BZM1 189 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 GCM1Q9NP62 436 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 TMEM100Q9NV29 134 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 OPN4Q9UHM6 478 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 CYB5R1Q9UHQ9 305 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 N6AMT1Q9Y5N5 214 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 LYVE1Q9Y5Y7 322 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 NBEAL1Q6ZS30 2694 aa8.08□□□□□ -1.12
MSH5-218ENST00000494646 TMEM178BH3BS89 294 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 IDH3BO43837 385 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 FOXH1O75593 365 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 CCNB2O95067 398 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 ACSM4P0C7M7 580 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 EPHA1P21709 976 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 GGT2P36268 569 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 PMELP40967 661 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 SLC6A9P48067 706 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 BTG1P62324 171 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 GK2Q14410 553 aaPredicted RBP8.07□□□□□ -1.12
MSH5-218ENST00000494646 ZMYND11Q15326 602 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 FAM201AQ5SY85 155 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 ZNF362Q5T0B9 420 aaPredicted RBP8.07□□□□□ -1.12
MSH5-218ENST00000494646 SLC27A4Q6P1M0 643 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 PGM2L1Q6PCE3 622 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 LYPD4Q6UWN0 246 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 ZNF620Q6ZNG0 422 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 C1QL2Q7Z5L3 287 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 SLC37A3Q8NCC5 494 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 PROKR2Q8NFJ6 384 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 OR9Q1Q8NGQ5 310 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 MEGF10Q96KG7 1140 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 SIGLEC11Q96RL6 698 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 DDOQ99489 341 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 SLC30A2Q9BRI3 323 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 HCAR1Q9BXC0 346 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 C1QTNF5Q9BXJ0 243 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 PATZ1Q9HBE1 687 aaKnown RBP8.07□□□□□ -1.12
MSH5-218ENST00000494646 TMEM165Q9HC07 324 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 NDE1Q9NXR1 346 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 VNN3Q9NY84 501 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 ACTR3BQ9P1U1 418 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 U3KQV3 271 aa8.07□□□□□ -1.12
MSH5-218ENST00000494646 A0A0A6YYJ9 748 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms