RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF786Q8N393 782 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 OR1J1Q8NGS3 322 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 GGHQ92820 318 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 RHNO1Q9BSD3 238 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 NIPAL2Q9H841 368 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-223ENST00000494123 INPP5EQ9NRR6 644 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 CA10Q9NS85 328 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
BRCA1-223ENST00000494123 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 CENPEQ02224 2701 aa12.57□□□□□ -0.4
BRCA1-223ENST00000494123 A0A1W2PPR1 153 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 HS3ST1O14792 307 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 IGHA1P01876 353 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 LCATP04180 440 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 ANXA2P07355 339 aaKnown RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 PIPP12273 146 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 MYL12AP19105 171 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 DCKP27707 260 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 OTX1P32242 354 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 GLRXP35754 106 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 ACTA2P62736 377 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 ACTG2P63267 376 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 ST3GAL4Q11206 333 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 KRTAP27-1Q3LI81 207 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 PLEKHG7Q6ZR37 379 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 LHFPL3Q86UP9 236 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 STX19Q8N4C7 294 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 YIPF7Q8N8F6 280 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 LILRB1Q8NHL6 650 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 APOBEC3DQ96AK3 386 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 TMEM80Q96HE8 168 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 COG8Q96MW5 612 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 DOK1Q99704 481 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 SP140LQ9H930 580 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 TBCCD1Q9NVR7 557 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 CHCHD3Q9NX63 227 aaKnown RBP12.56□□□□□ -0.4
BRCA1-223ENST00000494123 TPRKBQ9Y3C4 175 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 RTTNQ86VV8 2226 aa12.56□□□□□ -0.4
BRCA1-223ENST00000494123 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 E7EQL1 145 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 J3QW42 95 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 MAGEB4O15481 346 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 GPRIN2O60269 458 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ICMTO60725 284 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 NGFP01138 241 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 THBS4P35443 961 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 FABP6P51161 128 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 PPP1CBP62140 327 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF829Q3KNS6 432 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 RGS7BPQ6MZT1 257 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 RFPL4BQ6ZWI9 263 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 OR5L1Q8NGL2 311 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 DHRS9Q9BPW9 319 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ALG8Q9BVK2 526 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF442Q9H7R0 627 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 BRD7Q9NPI1 651 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 FAIMQ9NVQ4 179 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 MRM2Q9UI43 246 aaKnown RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 GNG8Q9UK08 70 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 DIMT1Q9UNQ2 313 aaKnown RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 CRYBG3Q68DQ2 2970 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 METTL15A6NJ78 407 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 SULT1C4O75897 302 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 TACSTD2P09758 323 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 CCDC159P0C7I6 412 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 SLC2A1P11166 492 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 PRF1P14222 555 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 APOBEC3AP31941 199 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 GALEQ14376 348 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 TP53I3Q53FA7 332 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 SPATA46Q5T0L3 261 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 NAA40Q86UY6 237 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 MYDGFQ969H8 173 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 JAM3Q9BX67 310 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 BLOC1S6Q9UL45 172 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 EXOSC1Q9Y3B2 195 aaKnown RBP12.55□□□□□ -0.4
BRCA1-223ENST00000494123 CMAHPQ9Y471 501 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 PCDHGB5Q9Y5G0 923 aa12.55□□□□□ -0.4
BRCA1-223ENST00000494123 TBX1O43435 398 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
BRCA1-223ENST00000494123 ROS1P08922 2347 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 GCH1P30793 250 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 DCTDP32321 178 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-223ENST00000494123 ERVS71-1P61550 626 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 MALLQ13021 153 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms