RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SMOC1Q9H4F8 434 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 IFT46Q9NQC8 304 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 MRPL22Q9NWU5 206 aaKnown RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 C19orf25Q9UFG5 118 aaPredicted RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 CABIN1Q9Y6J0 2220 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 SPTBN2O15020 2390 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 IGLV3-12A0A075B6K2 115 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 IGLV3-32A0A0A0MS00 114 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 TMEM269A0A1B0GVZ9 245 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 A0A1W2PR77 199 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 C4orf47A7E2U8 309 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 PATE3B3GLJ2 98 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 H7C1C5 153 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 CDX4O14627 284 aaPredicted RBP10.27□□□□□ -0.76
RFC4-214ENST00000494047 IFNA6P05013 189 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 GLB1P16278 677 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 ADH6P28332 368 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 STARP49675 285 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 ZNF41P51814 821 aaPredicted RBP10.27□□□□□ -0.76
RFC4-214ENST00000494047 H2BFSP57053 126 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 LCN6P62502 163 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 NAAAQ02083 359 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 ACY1Q03154 408 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 C11orf87Q6NUJ2 197 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 MTFR2Q6P444 385 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 KANSL1Q7Z3B3 1105 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 ZNF546Q86UE3 836 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 BVESQ8NE79 360 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 PXT1Q8NFP0 134 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 STEAP2Q8NFT2 490 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 OR51A4Q8NGJ6 313 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 OR5M1Q8NGP8 315 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 MITD1Q8WV92 249 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.76
RFC4-214ENST00000494047 ZBTB8AQ96BR9 441 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 C10orf35Q96D05 121 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 TAS2R4Q9NYW5 299 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 MKL2Q9ULH7 1088 aa10.27□□□□□ -0.76
RFC4-214ENST00000494047 NOP16Q9Y3C1 178 aaKnown RBP10.27□□□□□ -0.76
RFC4-214ENST00000494047 DCHS1Q96JQ0 3298 aa10.27□□□□□ -0.77
RFC4-214ENST00000494047 PCDH15Q96QU1 1955 aa10.27□□□□□ -0.77
RFC4-214ENST00000494047 LOC105371267A0A1B0GV96 52 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 RAB19A4D1S5 217 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 OR5H14A6NHG9 310 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF878C9JN71 531 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 TLX3O43711 291 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 CA11O75493 328 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 DUS4LO95620 317 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 CER1O95813 267 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 CFDP00746 253 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 IGHG1P01857 330 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 HLA-AP01891 365 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 FCER2P06734 321 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF883P0CG24 379 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 PNLIPP16233 465 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 EIF1P41567 113 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 PRKXP51817 358 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 NXPH1P58417 271 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 HSF1Q00613 529 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 TLE3Q04726 772 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF239Q16600 458 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 SLC35D2Q76EJ3 337 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 MARCH3Q86UD3 253 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 PNLDC1Q8NA58 520 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 PLPP7Q8NBV4 271 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 KCNG3Q8TAE7 436 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ST7LQ8TDW4 575 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 RNF138Q8WVD3 245 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ST8SIA2Q92186 375 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 CLIP3Q96DZ5 547 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 AIFM2Q9BRQ8 373 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 REG4Q9BYZ8 158 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 G6PC2Q9NQR9 355 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 RASL12Q9NYN1 266 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 GDF2Q9UK05 429 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 TNFSF18Q9UNG2 199 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ADAMTS9Q9P2N4 1935 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 DNAH14Q0VDD8 3507 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 IGHV1OR21-1A0A087WYE8 117 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 DCDC2BA2VCK2 349 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 CEACAM18A8MTB9 384 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 SYT7O43581 403 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 HPP00738 406 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 TMIGD3P0DMS9 266 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 CEACAM1P13688 526 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF20P17024 532 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 MAOBP27338 520 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 GNALP38405 381 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 GFERP55789 205 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 RPS15P62841 145 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 GRB2P62993 217 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 RNF4P78317 190 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 DHRS2Q13268 280 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 SURF2Q15527 256 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms