RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 LCN8Q6JVE9 175 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 CFAP77Q6ZQR2 320 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 NAA40Q86UY6 237 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 C1orf174Q8IYL3 243 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 AQP11Q8NBQ7 271 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 NPEPL1Q8NDH3 523 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 OR2Z1Q8NG97 314 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 OR51L1Q8NGJ5 315 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 OR8D4Q8NGM9 314 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 ELMOD3Q96FG2 381 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 DCLRE1CQ96SD1 692 aaKnown RBP9.03□□□□□ -0.96
COL6A3-214ENST00000493608 THTPAQ9BU02 230 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 CDADC1Q9BWV3 514 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 TRIM15Q9C019 465 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 EGLN1Q9GZT9 426 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 WDR76Q9H967 626 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 CYSLTR2Q9NS75 346 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 TAS2R1Q9NYW7 299 aa9.03□□□□□ -0.96
COL6A3-214ENST00000493608 ISPDA4D126 451 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 F5H5K5 113 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 BHLHE40O14503 412 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 IDH3BO43837 385 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 UBOX5O94941 541 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 SOX14O95416 240 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 MSMBP08118 114 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 KITLGP21583 273 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 SRP14P37108 136 aaKnown RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 LIPAP38571 399 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 HIST1H3AP68431 136 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 COX10Q12887 443 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 CDK5R2Q13319 367 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 MICAQ29983 383 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 FAM98BQ52LJ0 330 aaKnown RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF362Q5T0B9 420 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 HIST2H3PS2Q5TEC6 136 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 OR2T5Q6IEZ7 315 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 OR2T2Q6IF00 324 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF770Q6IQ21 691 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 SLC18B1Q6NT16 456 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 FAHD2BQ6P2I3 314 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 HIST2H3AQ71DI3 136 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ZBTB46Q86UZ6 589 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 GLCCI1Q86VQ1 547 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 PHC2Q8IXK0 858 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ARHGAP24Q8N264 748 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 SLC26A10Q8NG04 563 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 OR52L1Q8NGH7 329 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 OR2AJ1Q8NGZ0 328 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 OR2T29Q8NH02 315 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 RAB1CQ92928 201 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 TMEM186Q96B77 213 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 HAVCR1Q96D42 359 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 FAHD2AQ96GK7 314 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 PITX2Q99697 317 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 TSSK6Q9BXA6 273 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 TBC1D23Q9NUY8 699 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ARMC1Q9NVT9 282 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 MRPL22Q9NWU5 206 aaKnown RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 IL20Q9NYY1 176 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 UBAP1Q9NZ09 502 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 ZDHHC8Q9ULC8 765 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 SAMHD1Q9Y3Z3 626 aaKnown RBP9.02□□□□□ -0.97
COL6A3-214ENST00000493608 CDH10Q9Y6N8 788 aa9.02□□□□□ -0.97
COL6A3-214ENST00000493608 IGHV3-64DA0A0J9YX35 117 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 H0YL77 283 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 H3BSA7 217 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 PLPP2O43688 288 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 GYPBP06028 91 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 ADH4P08319 380 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 SBK2P0C263 348 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 PSKH1P11801 424 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 EPHA1P21709 976 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 SLC36A3Q495N2 470 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 ACSM5Q6NUN0 579 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 RASSF6Q6ZTQ3 369 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 LINC00471Q8N535 108 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 ATG16L2Q8NAA4 619 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 SLC37A3Q8NCC5 494 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 BHLHE23Q8NDY6 225 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 PROKR2Q8NFJ6 384 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 OR9Q1Q8NGQ5 310 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 OR4Q3Q8NH05 313 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 OR51F2Q8NH61 342 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 ITLN1Q8WWA0 313 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 TMEM158Q8WZ71 300 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 APOBEC3DQ96AK3 386 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-214ENST00000493608 TIMD4Q96H15 378 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 LRGUKQ96M69 825 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 DDOQ99489 341 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 COQ7Q99807 217 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 GAL3ST1Q99999 423 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 NIPSNAP1Q9BPW8 284 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 CHID1Q9BWS9 393 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 HDHD2Q9H0R4 259 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 MUC13Q9H3R2 512 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 MAGIXQ9H6Y5 334 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms