RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZNF611Q8N823 705 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 OR4C15Q8NGM1 316 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 AKR7LQ8NHP1 331 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC35B4Q969S0 331 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PLA2G12AQ9BZM1 189 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 FKRPQ9H9S5 495 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 NPDC1Q9NQX5 325 aaPredicted RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 GFOD1Q9NXC2 390 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 MYEF2Q9P2K5 600 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ICAM5Q9UMF0 924 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 GTF3C1Q12789 2109 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4□□□□□ -1.773e-9■■■■□ 21.5
TRA2B-215ENST00000492417 DENND4AQ7Z401 1863 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 WNK2Q9Y3S1 2297 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 TRBV2A0A0J9YWF9 115 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF814B7Z6K7 855 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 FTCDNL1E5RQL4 147 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 K7EM74 188 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 NME2P1O60361 137 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SELENOFO60613 162 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SC5DO75845 299 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 NEURL1O76050 574 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC22A5O76082 557 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 IFNA2P01563 188 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 HLA-HP01893 362 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 CYC1P08574 325 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SMIM18P0DKX4 95 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 GABRA1P14867 456 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 NME2P22392 152 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 C21orf33P30042 268 aaPredicted RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ACAA2P42765 397 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 SELENOPP49908 381 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 RAC3P60763 192 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ECH1Q13011 328 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 DYRK1AQ13627 763 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 MAD2L1BPQ15013 274 aaPredicted RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ABCA11PQ4W5N1 156 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PAN3Q58A45 887 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 TMEM69Q5SWH9 247 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF322Q6U7Q0 402 aaPredicted RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ALKAL2Q6UX46 152 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 DPY19L2P2Q6ZN68 376 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 MRGPRGQ86SM5 289 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC35F2Q8IXU6 374 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF101Q8IZC7 436 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 BATF2Q8N1L9 274 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ARIH2OSQ8N7S6 290 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 TRMT10AQ8TBZ6 339 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 STK35Q8TDR2 534 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC7A6Q92536 515 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 RBPMSQ93062 196 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF385AQ96PM9 386 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ELOVL3Q9HB03 270 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 IL20Q9NYY1 176 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 RASD1Q9Y272 281 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 TMEM14AQ9Y6G1 99 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ATP23Q9Y6H3 246 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 CSPG4Q6UVK1 2322 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 TMEM269A0A1B0GVZ9 245 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 A0A1W2PQD3 144 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PLSCR5A0PG75 271 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 AGPAT2O15120 278 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 FABP7O15540 132 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 LRRTM2O43300 516 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 DHHO43323 396 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 AQP8O94778 261 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZIC2O95409 532 aaPredicted RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 ALPLP05186 524 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SFTPBP07988 381 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PET100P0DJ07 73 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ALDH3B1P43353 468 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 TGM4P49221 684 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 COTL1Q14019 142 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 OPCMLQ14982 345 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ETFDHQ16134 617 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF674Q2M3X9 581 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC36A2Q495M3 483 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 OR2G6Q5TZ20 316 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PAQR6Q6TCH4 344 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 THSD4Q6ZMP0 1018 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF620Q6ZNG0 422 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 IDO2Q6ZQW0 420 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC16A9Q7RTY1 509 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 DCXRQ7Z4W1 244 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 LYSMD2Q8IV50 215 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 C17orf47Q8NEP4 570 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 BBS1Q8NFJ9 593 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 HSD17B8Q92506 261 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SPTSSAQ969W0 71 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 MIB2Q96AX9 1013 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 FBXO17Q96EF6 278 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 NPAS1Q99742 590 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 GSX2Q9BZM3 304 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 UNKLQ9H9P5 680 aaKnown RBP4□□□□□ -1.77
TRA2B-215ENST00000492417 OBP2BQ9NPH6 170 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 ACOT13Q9NPJ3 140 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 SLC52A3Q9NQ40 469 aa4□□□□□ -1.77
TRA2B-215ENST00000492417 HINT3Q9NQE9 182 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms