RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CYP2R1Q6VVX0 501 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 CFAP77Q6ZQR2 320 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ZBTB46Q86UZ6 589 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 LINC00471Q8N535 108 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
LSM2-213ENST00000491421 BHLHE23Q8NDY6 225 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 SEMA6DQ8NFY4 1073 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 OR8G5Q8NG78 346 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 OR10AD1Q8NGE0 317 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 OR52E2Q8NGJ4 325 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ZNF582Q96NG8 517 aaPredicted RBP6.97□□□□□ -1.29
LSM2-213ENST00000491421 OR2V2Q96R30 315 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 PITX2Q99697 317 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ATF6BQ99941 703 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 HCAR1Q9BXC0 346 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 EGLN3Q9H6Z9 239 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 C7orf69Q9H7B7 122 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 WDR76Q9H967 626 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 LYVE1Q9Y5Y7 322 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 CDH10Q9Y6N8 788 aa6.97□□□□□ -1.29
LSM2-213ENST00000491421 F5H5K5 113 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 IFNL4K9M1U5 179 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 TNFRSF11BO00300 401 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 FOXH1O75593 365 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 ACSM4P0C7M7 580 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 SELEP16581 610 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 ADRA2CP18825 462 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 ZFP36P26651 326 aaKnown RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 GGT2P36268 569 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 MDH2P40926 338 aaKnown RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 SRP9P49458 86 aaKnown RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 MMP16P51512 607 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 HMGA2P52926 109 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 TRAP1Q12931 704 aaKnown RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 OCLNQ16625 522 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 RSPO1Q2MKA7 263 aaPredicted RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 KRTAP27-1Q3LI81 207 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 TMEM155Q4W5P6 130 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 LRRC28Q86X40 367 aaPredicted RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 MUC20Q8N307 709 aaPredicted RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 BPIFB2Q8N4F0 458 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 PROKR2Q8NFJ6 384 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 OR9Q2Q8NGE9 314 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 OR13G1Q8NGZ3 307 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 NANPQ8TBE9 248 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 ZFAND2BQ8WV99 257 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 MEGF10Q96KG7 1140 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 SIGLEC11Q96RL6 698 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 BTBD10Q9BSF8 475 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 C1QTNF5Q9BXJ0 243 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 TRIM15Q9C019 465 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 PATZ1Q9HBE1 687 aaKnown RBP6.96□□□□□ -1.3
LSM2-213ENST00000491421 GCM1Q9NP62 436 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 OPN4Q9UHM6 478 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 CYB5R1Q9UHQ9 305 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 KCNG2Q9UJ96 466 aa6.96□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4EA0A075B759 164 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4CA0A0B4J2A2 164 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 IGHV3-64DA0A0J9YX35 117 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 TCRBV5S2A0A599 114 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 LRRC30A6NM36 301 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 IQCF6A8MYZ5 107 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 B2RBV5 119 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4DF5H284 164 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 F5H5P2 479 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 H0YL77 283 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 BHLHE40O14503 412 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 CCNB2O95067 398 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 GASTP01350 101 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 LCATP04180 440 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4FP0DN26 164 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 ZNF823P16415 610 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 PYCR1P32322 319 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MAGEA2P43356 314 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 TPTEP56180 551 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PRSS12P56730 875 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 HILS1P60008 231 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 SEC61A1P61619 476 aaKnown RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 ACTG1P63261 375 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MALLQ13021 153 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 GK2Q14410 553 aaPredicted RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 ESCO2Q56NI9 601 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 ZNF770Q6IQ21 691 aaPredicted RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 RASSF6Q6ZTQ3 369 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 USP43Q70EL4 1123 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PGAP1Q75T13 922 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 DHFR2Q86XF0 187 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 ARHGAP24Q8N264 748 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 FITM2Q8N6M3 262 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 CYB561A3Q8NBI2 242 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 AQP11Q8NBQ7 271 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 OR4C15Q8NGM1 316 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 OR8D4Q8NGM9 314 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 OR2T4Q8NH00 348 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 ZNF420Q8TAQ5 688 aaPredicted RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 SPTSSAQ969W0 71 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms