RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PTPN6P29350 595 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CASQ1P31415 396 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PEX19P40855 299 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PTGDSP41222 190 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PPICP45877 212 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 EMDP50402 254 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 SERPINB8P50452 374 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CCNG1P51959 295 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ZNF136P52737 540 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CAPZA1P52907 286 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 NAGLUP54802 743 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 GNB2P62879 340 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RPP38P78345 283 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 C2orf54Q08AI8 447 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CEACAM7Q14002 265 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 SLMAPQ14BN4 828 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 GGTA1PQ4G0N0 100 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ACSF3Q4G176 576 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 TRMT12Q53H54 448 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 FAM219BQ5XKK7 198 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 OR52E8Q6IFG1 317 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 SLC48A1Q6P1K1 146 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 C2orf66Q6UXQ4 117 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 SYT10Q6XYQ8 523 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RPS27LQ71UM5 84 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 PAGE2Q7Z2X7 111 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 COMMD6Q7Z4G1 85 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 LIX1Q8N485 282 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RELL2Q8NC24 303 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 OR4K14Q8NGD5 310 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 LINC01560Q8TB33 94 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RNASE6Q93091 150 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 HGDQ93099 445 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ATP6V1E2Q96A05 226 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 TM4SF18Q96CE8 201 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 VSIG2Q96IQ7 327 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 JSRP1Q96MG2 331 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 ZNF681Q96N22 645 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RILPQ96NA2 401 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 MYCBPQ99417 103 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 MRPL57Q9BQC6 102 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 INPP5KQ9BT40 448 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 UGT2B28Q9BY64 529 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RAB17Q9H0T7 212 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 NXF5Q9H1B4 397 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 EXO5Q9H790 373 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CALHM2Q9HA72 323 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 FARSBQ9NSD9 589 aaKnown RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 ZNF446Q9NWS9 450 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 AHSPQ9NZD4 102 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 NINJ2Q9NZG7 142 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ZNF629Q9UEG4 869 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 KLHL21Q9UJP4 597 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PCTPQ9UKL6 214 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PSME2Q9UL46 239 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RAB26Q9ULW5 256 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 RPH3AQ9Y2J0 694 aaPredicted RBP2.29□□□□□ -2.04
PHC3-213ENST00000491258 C15orf41Q9Y2V0 281 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 PTPRBP23467 1997 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CRYBG3Q68DQ2 2970 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 RYR1P21817 5038 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 SDK2Q58EX2 2172 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 A0A0B4J203 849 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 TUBAL3A6NHL2 446 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 GOLGA6L10A6NI86 522 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 A8MT66 165 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 B4DXG7 233 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 PLOD3O60568 738 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 SHOX2O60902 331 aaPredicted RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 SMIM24O75264 130 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 CDH16O75309 829 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 UGT2B11O75310 529 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 NME6O75414 186 aaPredicted RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 REM1O75628 298 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 CBR3O75828 277 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 RCBTB2O95199 551 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 OTCP00480 354 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 PDYNP01213 254 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 VIMP08670 466 aaKnown RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 RPS17P08708 135 aaKnown RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 SNRPAP09012 282 aaKnown RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 CT45A8P0DMV1 189 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 CT45A9P0DMV2 189 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 TSPAN8P19075 237 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 CSNK2A2P19784 350 aaPredicted RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 NT5EP21589 574 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 PHBP35232 272 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 OPRM1P35372 400 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 SLCO1A2P46721 670 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 STARP49675 285 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 TMED10P49755 219 aaKnown RBP2.28□□□□□ -2.04
PHC3-213ENST00000491258 SERPINB9P50453 376 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 LHX2P50458 406 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 P2RY4P51582 365 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 HMGCS1Q01581 520 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 SRYQ05066 204 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 IFT88Q13099 833 aa2.28□□□□□ -2.04
PHC3-213ENST00000491258 EXOSC7Q15024 291 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms