RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ABCB10Q9NRK6 738 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 PEX16Q9Y5Y5 336 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TRBV5-5A0A0J9YX44 114 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TPOP07202 933 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 GALP22466 123 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 CCNOP22674 350 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 THBS2P35442 1172 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 RNPS1Q15287 305 aaKnown RBP12.2□□□□□ -0.46
SMPD4-219ENST00000491128 HIKESHIQ53FT3 197 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 VWA1Q6PCB0 445 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 ABHD12BQ7Z5M8 362 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TMEM45BQ96B21 275 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 DIRAS2Q96HU8 199 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 A0A075B6Q4 140 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 IQCMA0A1B0GVH7 501 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 LINC00854A0A1B0GVQ3 168 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SGCEO43556 437 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 GATBO75879 557 aaKnown RBP12.19□□□□□ -0.46
SMPD4-219ENST00000491128 MMP16P51512 607 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 CCR9P51686 369 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF846Q147U1 533 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 ELFN2Q5R3F8 820 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 C1QTNF12Q5T7M4 302 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 FOXL2NBQ6ZUU3 175 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 FGGYQ96C11 551 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 PARPBPQ9NWS1 579 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF224Q9NZL3 707 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 MYEF2Q9P2K5 600 aaKnown RBP12.19□□□□□ -0.46
SMPD4-219ENST00000491128 CRNNQ9UBG3 495 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SH3BGRL2Q9UJC5 107 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF587BE7ETH6 402 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 AQP7O14520 342 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 EPXP11678 715 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 DEGS2Q6QHC5 323 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 RNF144BQ7Z419 303 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SAMD12Q8N8I0 201 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 Q8NA96 180 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 SARAFQ96BY9 339 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 CLCF1Q9UBD9 225 aa12.19□□□□□ -0.46
SMPD4-219ENST00000491128 KALRNO60229 2985 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF724A8MTY0 619 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 CD1AP06126 327 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 HNRNPCP07910 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 CD79AP11912 226 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 ELK1P19419 428 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 GTF3C1Q12789 2109 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 PLA2G7Q13093 441 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 SPANXN2Q5MJ10 180 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 METAP1DQ6UB28 335 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 CPEB3Q8NE35 698 aaKnown RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 RNF121Q9H920 327 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 GPR84Q9NQS5 396 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 PRR14LQ5THK1 2151 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 FAM25AB3EWG3 89 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 FAM25CB3EWG5 89 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 FAM25GB3EWG6 89 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 SYT7O43581 403 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 LYZL6O75951 148 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 NPR2P20594 1047 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 GNALP38405 381 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 HTR5AP47898 357 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 PSMA6P60900 246 aaKnown RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 P2RY14Q15391 338 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 RIPPLY2Q5TAB7 128 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 DDI2Q5TDH0 399 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 FAM131AQ6UXB0 335 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 NCCRP1Q6ZVX7 275 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 TRMT10AQ8TBZ6 339 aaKnown RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-219ENST00000491128 SPACA5Q96QH8 159 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 GAL3ST1Q99999 423 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 WNT5BQ9H1J7 359 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 V9GYH0 126 aa12.18□□□□□ -0.46
SMPD4-219ENST00000491128 CACNA1AO00555 2505 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 TRAV1-2A0A0B4J238 106 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 M0R135 149 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 IL18BPO95998 194 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 EIF4EP06730 217 aaKnown RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ADRB1P08588 477 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 PABPC1L2AQ5JQF8 200 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 CNIH2Q6PI25 160 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 SEM1Q6ZVN7 128 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms