RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SPARCP09486 303 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 KITLGP21583 273 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 USF1P22415 310 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 EPHA2P29317 976 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 GSTT1P30711 240 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF81P51508 661 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 MRPS11P82912 194 aaKnown RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 RIN1Q13671 783 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 DCXRQ7Z4W1 244 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 CPOQ8IVL8 374 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 C1QTNF5Q9BXJ0 243 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 TVP23BQ9NYZ1 205 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 OAZ3Q9UMX2 235 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PLSCR5A0PG75 271 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 PRODHO43272 600 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 IGHV1-46P01743 117 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 ADH4P08319 380 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 RAC2P15153 192 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 SLC2A5P22732 501 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 COL8A2P25067 703 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 OTX1P32242 354 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-207ENST00000490696 LIPAP38571 399 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 CCL8P80075 99 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-207ENST00000490696 SNAPC1Q16533 368 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 FBXW12Q6X9E4 464 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 BBS1Q8NFJ9 593 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 RDH5Q92781 318 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 YIPF5Q969M3 257 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 INTS14Q96SY0 518 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 PKP2Q99959 881 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
VPS26A-207ENST00000490696 YLPM1P49750 1951 aaKnown RBP13.1□□□□□ -0.31
VPS26A-207ENST00000490696 IGHV4-61A0A0C4DH41 118 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SAC3D1A6NKF1 404 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 ZAR1LA6NP61 321 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 M0R135 149 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SPRY3O43610 288 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 TIMM8AO60220 97 aaPredicted RBP13.09□□□□□ -0.31
VPS26A-207ENST00000490696 RP2O75695 350 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 ACHEP22303 614 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 TPTEP56180 551 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 TMEM249Q2WGJ8 235 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SLC35D3Q5M8T2 416 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
VPS26A-207ENST00000490696 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 ERI1Q8IV48 349 aaKnown RBP13.09□□□□□ -0.31
VPS26A-207ENST00000490696 OR6N2Q8NGY6 317 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 SLAMF6Q96DU3 332 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 ZMYND19Q96E35 227 aaPredicted RBP13.09□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF799Q96GE5 643 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 CIB1Q99828 191 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 OSBPL10Q9BXB5 764 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 CHODLQ9H9P2 273 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 MSL2Q9HCI7 577 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 PTTG3PQ9NZH4 202 aa13.09□□□□□ -0.31
VPS26A-207ENST00000490696 PRKYO43930 277 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 IGFBP5P24593 272 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 EFNB1P98172 346 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 CDK5R2Q13319 367 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 GGTLC2Q14390 218 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 TSTQ16762 297 aaKnown RBP13.08□□□□□ -0.32
VPS26A-207ENST00000490696 KLHL12Q53G59 568 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 ZMAT1Q5H9K5 638 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 C12orf73Q69YU5 71 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 Q6ZR03 302 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 RAB3IPQ96QF0 476 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-207ENST00000490696 COPS4Q9BT78 406 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 ENOPH1Q9UHY7 261 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 ZDHHC8Q9ULC8 765 aa13.08□□□□□ -0.32
VPS26A-207ENST00000490696 ZNF878C9JN71 531 aa13.07□□□□□ -0.32
VPS26A-207ENST00000490696 CD5LO43866 347 aa13.07□□□□□ -0.32
VPS26A-207ENST00000490696 SELENOFO60613 162 aa13.07□□□□□ -0.32
VPS26A-207ENST00000490696 LILRA1O75019 489 aa13.07□□□□□ -0.32
VPS26A-207ENST00000490696 LCATP04180 440 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms