RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 RGP1Q92546 391 aaPredicted RBP11.59□□□□□ -0.55
SHOX2-205ENST00000490689 HAS2Q92819 552 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 PIGTQ969N2 578 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 TLNRD1Q9H1K6 362 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 UNKLQ9H9P5 680 aaKnown RBP11.59□□□□□ -0.55
SHOX2-205ENST00000490689 ASH2LQ9UBL3 628 aa11.59□□□□□ -0.55
SHOX2-205ENST00000490689 RLFQ13129 1914 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 TSTD3H0UI37 97 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 HRKO00198 91 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 LY86O95711 162 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 FGF2P09038 288 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 HOXA1P49639 335 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 HAGHQ16775 308 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 C1QL3Q5VWW1 255 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 CA13Q8N1Q1 262 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF561Q8N587 486 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 SLC37A2Q8TED4 501 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 NELFAQ9H3P2 528 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 PIPOXQ9P0Z9 390 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 DOCK6Q96HP0 2047 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 A0A1W2PR64 198 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 FCGR2AP12318 317 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 OPRM1P35372 400 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 NPBWR1P48145 328 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 PPP2CBP62714 309 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 PPP2CAP67775 309 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 RAB32Q13637 225 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 MPPED2Q15777 294 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 HIST2H3PS2Q5TEC6 136 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 UQCC3Q6UW78 93 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM182Q6ZP80 229 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 OR56B1Q8NGI3 324 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 LILRB1Q8NHL6 650 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 NICN1Q9BSH3 213 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 NUDT9Q9BW91 350 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 C1orf198Q9H425 327 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 C1orf123Q9NWV4 160 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 FAM221AA4D161 298 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 OR5K4A6NMS3 321 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 ARPC3O15145 178 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 IFNA5P01569 189 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 FAM157BP0CG42 384 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 GAS1P54826 345 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF74Q16587 644 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 LHX8Q68G74 356 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 FAM160A2Q8N612 972 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 OTOSQ8NHW6 89 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 KIRREL1Q96J84 757 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 SYT3Q9BQG1 590 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 TMPRSS13Q9BYE2 586 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-205ENST00000490689 CHRNA9Q9UGM1 479 aa11.58□□□□□ -0.56
SHOX2-205ENST00000490689 A0A087WV48 116 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 OR4C45A6NMZ5 311 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 RFC3P40938 356 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 DAP3P51398 398 aaKnown RBP11.57□□□□□ -0.56
SHOX2-205ENST00000490689 EGR3Q06889 387 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 ZIC1Q15915 447 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 BATFQ16520 125 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PRTGQ2VWP7 1150 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 ALKBH2Q6NS38 261 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 BEND4Q6ZU67 534 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 LDLRAD3Q86YD5 345 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 RLN3Q8WXF3 142 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 OR8B4Q96RC9 309 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PBX4Q9BYU1 374 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 NXT1Q9UKK6 140 aaKnown RBP11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PRSS37A4D1T9 235 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 HPP00738 406 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 IFNA2P01563 188 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 FBLP22087 321 aaKnown RBP11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PTGFRP43088 359 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 SSX2Q16385 188 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 FAM209BQ5JX69 171 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 C1orf140Q5VVS0 124 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF695Q8IW36 515 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF595Q8IYB9 648 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 SLC43A2Q8N370 569 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 LRRC18Q8N456 261 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 MMP25Q9NPA2 562 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PLEK2Q9NYT0 353 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 CES1P1Q9UKY3 287 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 LRP12Q9Y561 859 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 CPED1A4D0V7 1026 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 A6NIZ1 184 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 A6NLC8 198 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 RAP1BP61224 184 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 RAP1AP62834 184 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 FMODQ06828 376 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms